Gene : Medtr5g024500 M. truncatula Mt4.0v1
Defline:  (1 of 4) PF00628//PF13508//PF16135 - PHD-finger (PHD) // Acetyltransferase (GNAT) domain (Acetyltransf_7) // TPL-binding domain in jasmonate signalling (Jas) Description:  RING/FYVE/PHD zinc finger protein
Genomic Order:  1423 Name:  ? Medtr5g024500
Secondary Identifier:  ? PAC:31089183
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g024500 0.5kb upstream 0.5kb upstream 1787 true chr5: 9852825-9854611 Medicago truncatula
Medtr5g024500 0.5kb upstream 0.5kb upstream 500 false chr5: 9852825-9853324 Medicago truncatula
Medtr5g024500 0.5kb downstream 0.5kb downstream 1787 true chr5: 9853325-9855111 Medicago truncatula
Medtr5g024500 0.5kb downstream 0.5kb downstream 500 false chr5: 9854612-9855111 Medicago truncatula
Medtr5g024500 1.0kb upstream 1.0kb upstream 2287 true chr5: 9852325-9854611 Medicago truncatula
Medtr5g024500 1.0kb upstream 1.0kb upstream 1000 false chr5: 9852325-9853324 Medicago truncatula
Medtr5g024500 1.0kb downstream 1.0kb downstream 2287 true chr5: 9853325-9855611 Medicago truncatula
Medtr5g024500 1.0kb downstream 1.0kb downstream 1000 false chr5: 9854612-9855611 Medicago truncatula
Medtr5g024500 2.0kb upstream 2.0kb upstream 3287 true chr5: 9851325-9854611 Medicago truncatula
Medtr5g024500 2.0kb upstream 2.0kb upstream 2000 false chr5: 9851325-9853324 Medicago truncatula
Medtr5g024500 2.0kb downstream 2.0kb downstream 3287 true chr5: 9853325-9856611 Medicago truncatula
Medtr5g024500 2.0kb downstream 2.0kb downstream 2000 false chr5: 9854612-9856611 Medicago truncatula
Medtr5g024500 5.0kb upstream 5.0kb upstream 6287 true chr5: 9848325-9854611 Medicago truncatula
Medtr5g024500 5.0kb upstream 5.0kb upstream 5000 false chr5: 9848325-9853324 Medicago truncatula
Medtr5g024500 5.0kb downstream 5.0kb downstream 6287 true chr5: 9853325-9859611 Medicago truncatula
Medtr5g024500 5.0kb downstream 5.0kb downstream 5000 false chr5: 9854612-9859611 Medicago truncatula
Medtr5g024500 10.0kb upstream 10.0kb upstream 11287 true chr5: 9843325-9854611 Medicago truncatula
Medtr5g024500 10.0kb upstream 10.0kb upstream 10000 false chr5: 9843325-9853324 Medicago truncatula
Medtr5g024500 10.0kb downstream 10.0kb downstream 11287 true chr5: 9853325-9864611 Medicago truncatula
Medtr5g024500 10.0kb downstream 10.0kb downstream 10000 false chr5: 9854612-9864611 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315049 5265 Fabidae View MSA
124072957 5270 Rosid View MSA
123753640 5271 Pentapetalae View MSA
122796648 5272 Eudicot View MSA
122050898 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain