Gene : Medtr5g024130 M. truncatula Mt4.0v1
Defline:  (1 of 10) 1.14.19.2 - Stearoyl-[acyl-carrier-protein] 9-desaturase / Stearyl-ACP desaturase Description:  stearoyl-acyl-carrier desaturase
Genomic Order:  1401 Name:  ? Medtr5g024130
Secondary Identifier:  ? PAC:31089390
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5147 Medicago truncatula pathologic  
Mtruncatula PWY-5156 Medicago truncatula pathologic  
Mtruncatula PWY-5366 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g024130 0.5kb upstream 0.5kb upstream 3701 true chr5: 9667333-9671033 Medicago truncatula
Medtr5g024130 0.5kb upstream 0.5kb upstream 500 false chr5: 9670534-9671033 Medicago truncatula
Medtr5g024130 0.5kb downstream 0.5kb downstream 3701 true chr5: 9666833-9670533 Medicago truncatula
Medtr5g024130 0.5kb downstream 0.5kb downstream 500 false chr5: 9666833-9667332 Medicago truncatula
Medtr5g024130 1.0kb upstream 1.0kb upstream 4201 true chr5: 9667333-9671533 Medicago truncatula
Medtr5g024130 1.0kb upstream 1.0kb upstream 1000 false chr5: 9670534-9671533 Medicago truncatula
Medtr5g024130 1.0kb downstream 1.0kb downstream 4201 true chr5: 9666333-9670533 Medicago truncatula
Medtr5g024130 1.0kb downstream 1.0kb downstream 1000 false chr5: 9666333-9667332 Medicago truncatula
Medtr5g024130 2.0kb upstream 2.0kb upstream 5201 true chr5: 9667333-9672533 Medicago truncatula
Medtr5g024130 2.0kb upstream 2.0kb upstream 2000 false chr5: 9670534-9672533 Medicago truncatula
Medtr5g024130 2.0kb downstream 2.0kb downstream 5201 true chr5: 9665333-9670533 Medicago truncatula
Medtr5g024130 2.0kb downstream 2.0kb downstream 2000 false chr5: 9665333-9667332 Medicago truncatula
Medtr5g024130 5.0kb upstream 5.0kb upstream 8201 true chr5: 9667333-9675533 Medicago truncatula
Medtr5g024130 5.0kb upstream 5.0kb upstream 5000 false chr5: 9670534-9675533 Medicago truncatula
Medtr5g024130 5.0kb downstream 5.0kb downstream 8201 true chr5: 9662333-9670533 Medicago truncatula
Medtr5g024130 5.0kb downstream 5.0kb downstream 5000 false chr5: 9662333-9667332 Medicago truncatula
Medtr5g024130 10.0kb upstream 10.0kb upstream 13201 true chr5: 9667333-9680533 Medicago truncatula
Medtr5g024130 10.0kb upstream 10.0kb upstream 10000 false chr5: 9670534-9680533 Medicago truncatula
Medtr5g024130 10.0kb downstream 10.0kb downstream 13201 true chr5: 9657333-9670533 Medicago truncatula
Medtr5g024130 10.0kb downstream 10.0kb downstream 10000 false chr5: 9657333-9667332 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314114 5265 Fabidae View MSA
124069229 5270 Rosid View MSA
123745832 5271 Pentapetalae View MSA
122789548 5272 Eudicot View MSA
122047247 5273 Angiosperm View MSA
121347152 5274 Embryophyte View MSA
123428838 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.778        
cufflinks 10.561     High  
cufflinks 6.749        
cufflinks 3.416        
cufflinks 17.485     High High
cufflinks 1.36       Low
cufflinks 2.489       Low
cufflinks 7.709        
cufflinks 6.087        

0 Strain