Gene : Medtr5g010260 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR10894 - NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 Description:  NOP56-like pre RNA processing ribonucleoprotein
Genomic Order:  438 Name:  ? Medtr5g010260
Secondary Identifier:  ? PAC:31088784
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g010260 0.5kb upstream 0.5kb upstream 4321 true chr5: 2700394-2704714 Medicago truncatula
Medtr5g010260 0.5kb upstream 0.5kb upstream 500 false chr5: 2704215-2704714 Medicago truncatula
Medtr5g010260 0.5kb downstream 0.5kb downstream 4321 true chr5: 2699894-2704214 Medicago truncatula
Medtr5g010260 0.5kb downstream 0.5kb downstream 500 false chr5: 2699894-2700393 Medicago truncatula
Medtr5g010260 1.0kb upstream 1.0kb upstream 4821 true chr5: 2700394-2705214 Medicago truncatula
Medtr5g010260 1.0kb upstream 1.0kb upstream 1000 false chr5: 2704215-2705214 Medicago truncatula
Medtr5g010260 1.0kb downstream 1.0kb downstream 4821 true chr5: 2699394-2704214 Medicago truncatula
Medtr5g010260 1.0kb downstream 1.0kb downstream 1000 false chr5: 2699394-2700393 Medicago truncatula
Medtr5g010260 2.0kb upstream 2.0kb upstream 5821 true chr5: 2700394-2706214 Medicago truncatula
Medtr5g010260 2.0kb upstream 2.0kb upstream 2000 false chr5: 2704215-2706214 Medicago truncatula
Medtr5g010260 2.0kb downstream 2.0kb downstream 5821 true chr5: 2698394-2704214 Medicago truncatula
Medtr5g010260 2.0kb downstream 2.0kb downstream 2000 false chr5: 2698394-2700393 Medicago truncatula
Medtr5g010260 5.0kb upstream 5.0kb upstream 8821 true chr5: 2700394-2709214 Medicago truncatula
Medtr5g010260 5.0kb upstream 5.0kb upstream 5000 false chr5: 2704215-2709214 Medicago truncatula
Medtr5g010260 5.0kb downstream 5.0kb downstream 8821 true chr5: 2695394-2704214 Medicago truncatula
Medtr5g010260 5.0kb downstream 5.0kb downstream 5000 false chr5: 2695394-2700393 Medicago truncatula
Medtr5g010260 10.0kb upstream 10.0kb upstream 13821 true chr5: 2700394-2714214 Medicago truncatula
Medtr5g010260 10.0kb upstream 10.0kb upstream 10000 false chr5: 2704215-2714214 Medicago truncatula
Medtr5g010260 10.0kb downstream 10.0kb downstream 13821 true chr5: 2690394-2704214 Medicago truncatula
Medtr5g010260 10.0kb downstream 10.0kb downstream 10000 false chr5: 2690394-2700393 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041003 5273 Angiosperm View MSA
122288568 5265 Fabidae View MSA
124068125 5270 Rosid View MSA
123744603 5271 Pentapetalae View MSA
122786975 5272 Eudicot View MSA
121345420 5274 Embryophyte View MSA
123426153 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.81        
cufflinks 5.289        
cufflinks 7.309        
cufflinks 2.326       Low
cufflinks 13.154     High High
cufflinks 2.926        
cufflinks 3.845        
cufflinks 6.973        
cufflinks 3.146        

0 Strain