Gene : Medtr5g010160 M. truncatula Mt4.0v1
Defline:  (1 of 9) PF12043 - Domain of unknown function (DUF3527) (DUF3527) Description:  DUF3527 domain protein
Genomic Order:  433 Name:  ? Medtr5g010160
Secondary Identifier:  ? PAC:31090108
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g010160 0.5kb upstream 0.5kb upstream 3978 true chr5: 2653241-2657218 Medicago truncatula
Medtr5g010160 0.5kb upstream 0.5kb upstream 500 false chr5: 2656719-2657218 Medicago truncatula
Medtr5g010160 0.5kb downstream 0.5kb downstream 3978 true chr5: 2652741-2656718 Medicago truncatula
Medtr5g010160 0.5kb downstream 0.5kb downstream 500 false chr5: 2652741-2653240 Medicago truncatula
Medtr5g010160 1.0kb upstream 1.0kb upstream 4478 true chr5: 2653241-2657718 Medicago truncatula
Medtr5g010160 1.0kb upstream 1.0kb upstream 1000 false chr5: 2656719-2657718 Medicago truncatula
Medtr5g010160 1.0kb downstream 1.0kb downstream 4478 true chr5: 2652241-2656718 Medicago truncatula
Medtr5g010160 1.0kb downstream 1.0kb downstream 1000 false chr5: 2652241-2653240 Medicago truncatula
Medtr5g010160 2.0kb upstream 2.0kb upstream 5478 true chr5: 2653241-2658718 Medicago truncatula
Medtr5g010160 2.0kb upstream 2.0kb upstream 2000 false chr5: 2656719-2658718 Medicago truncatula
Medtr5g010160 2.0kb downstream 2.0kb downstream 5478 true chr5: 2651241-2656718 Medicago truncatula
Medtr5g010160 2.0kb downstream 2.0kb downstream 2000 false chr5: 2651241-2653240 Medicago truncatula
Medtr5g010160 5.0kb upstream 5.0kb upstream 8478 true chr5: 2653241-2661718 Medicago truncatula
Medtr5g010160 5.0kb upstream 5.0kb upstream 5000 false chr5: 2656719-2661718 Medicago truncatula
Medtr5g010160 5.0kb downstream 5.0kb downstream 8478 true chr5: 2648241-2656718 Medicago truncatula
Medtr5g010160 5.0kb downstream 5.0kb downstream 5000 false chr5: 2648241-2653240 Medicago truncatula
Medtr5g010160 10.0kb upstream 10.0kb upstream 13478 true chr5: 2653241-2666718 Medicago truncatula
Medtr5g010160 10.0kb upstream 10.0kb upstream 10000 false chr5: 2656719-2666718 Medicago truncatula
Medtr5g010160 10.0kb downstream 10.0kb downstream 13478 true chr5: 2643241-2656718 Medicago truncatula
Medtr5g010160 10.0kb downstream 10.0kb downstream 10000 false chr5: 2643241-2653240 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301789 5265 Fabidae View MSA
124065167 5270 Rosid View MSA
123751410 5271 Pentapetalae View MSA
122793362 5272 Eudicot View MSA
122047262 5273 Angiosperm View MSA
121310717 5274 Embryophyte View MSA
123348134 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.346       High
cufflinks 1.131        
cufflinks 1.025        
cufflinks 0.11       Low
cufflinks 1.702        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.09       Low
cufflinks 1.032        
cufflinks 0.076     Low Low

0 Strain