Gene : Medtr5g010390 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10024:SF225 - C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN Description:  calcium-dependent lipid-binding (CaLB domain) family protein
Genomic Order:  446 Name:  ? Medtr5g010390
Secondary Identifier:  ? PAC:31087017
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g010390 0.5kb upstream 0.5kb upstream 4910 true chr5: 2764074-2768983 Medicago truncatula
Medtr5g010390 0.5kb upstream 0.5kb upstream 500 false chr5: 2768484-2768983 Medicago truncatula
Medtr5g010390 0.5kb downstream 0.5kb downstream 4910 true chr5: 2763574-2768483 Medicago truncatula
Medtr5g010390 0.5kb downstream 0.5kb downstream 500 false chr5: 2763574-2764073 Medicago truncatula
Medtr5g010390 1.0kb upstream 1.0kb upstream 5410 true chr5: 2764074-2769483 Medicago truncatula
Medtr5g010390 1.0kb upstream 1.0kb upstream 1000 false chr5: 2768484-2769483 Medicago truncatula
Medtr5g010390 1.0kb downstream 1.0kb downstream 5410 true chr5: 2763074-2768483 Medicago truncatula
Medtr5g010390 1.0kb downstream 1.0kb downstream 1000 false chr5: 2763074-2764073 Medicago truncatula
Medtr5g010390 2.0kb upstream 2.0kb upstream 6410 true chr5: 2764074-2770483 Medicago truncatula
Medtr5g010390 2.0kb upstream 2.0kb upstream 2000 false chr5: 2768484-2770483 Medicago truncatula
Medtr5g010390 2.0kb downstream 2.0kb downstream 6410 true chr5: 2762074-2768483 Medicago truncatula
Medtr5g010390 2.0kb downstream 2.0kb downstream 2000 false chr5: 2762074-2764073 Medicago truncatula
Medtr5g010390 5.0kb upstream 5.0kb upstream 9410 true chr5: 2764074-2773483 Medicago truncatula
Medtr5g010390 5.0kb upstream 5.0kb upstream 5000 false chr5: 2768484-2773483 Medicago truncatula
Medtr5g010390 5.0kb downstream 5.0kb downstream 9410 true chr5: 2759074-2768483 Medicago truncatula
Medtr5g010390 5.0kb downstream 5.0kb downstream 5000 false chr5: 2759074-2764073 Medicago truncatula
Medtr5g010390 10.0kb upstream 10.0kb upstream 14410 true chr5: 2764074-2778483 Medicago truncatula
Medtr5g010390 10.0kb upstream 10.0kb upstream 10000 false chr5: 2768484-2778483 Medicago truncatula
Medtr5g010390 10.0kb downstream 10.0kb downstream 14410 true chr5: 2754074-2768483 Medicago truncatula
Medtr5g010390 10.0kb downstream 10.0kb downstream 10000 false chr5: 2754074-2764073 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308308 5265 Fabidae View MSA
124071853 5270 Rosid View MSA
123744879 5271 Pentapetalae View MSA
122793721 5272 Eudicot View MSA
122045075 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.057     Low  
cufflinks 0.026     Low  
cufflinks 0.015     Low Low
cufflinks 0.387        
cufflinks 0.018     Low  
cufflinks 0.144        
cufflinks 0.677       High
cufflinks 0.016     Low  
cufflinks 1.117       High

0 Strain