Gene : Medtr5g010420 M. truncatula Mt4.0v1
Defline:  (1 of 7) PF00122//PF00403//PF12710 - E1-E2 ATPase (E1-E2_ATPase) // Heavy-metal-associated domain (HMA) // haloacid dehalogenase-like hydrolase (HAD) Description:  heavy metal P-type ATPase
Genomic Order:  448 Name:  ? Medtr5g010420
Secondary Identifier:  ? PAC:31086318
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g010420 0.5kb upstream 0.5kb upstream 10208 true chr5: 2773962-2784169 Medicago truncatula
Medtr5g010420 0.5kb upstream 0.5kb upstream 500 false chr5: 2783670-2784169 Medicago truncatula
Medtr5g010420 0.5kb downstream 0.5kb downstream 10208 true chr5: 2773462-2783669 Medicago truncatula
Medtr5g010420 0.5kb downstream 0.5kb downstream 500 false chr5: 2773462-2773961 Medicago truncatula
Medtr5g010420 1.0kb upstream 1.0kb upstream 10708 true chr5: 2773962-2784669 Medicago truncatula
Medtr5g010420 1.0kb upstream 1.0kb upstream 1000 false chr5: 2783670-2784669 Medicago truncatula
Medtr5g010420 1.0kb downstream 1.0kb downstream 10708 true chr5: 2772962-2783669 Medicago truncatula
Medtr5g010420 1.0kb downstream 1.0kb downstream 1000 false chr5: 2772962-2773961 Medicago truncatula
Medtr5g010420 2.0kb upstream 2.0kb upstream 11708 true chr5: 2773962-2785669 Medicago truncatula
Medtr5g010420 2.0kb upstream 2.0kb upstream 2000 false chr5: 2783670-2785669 Medicago truncatula
Medtr5g010420 2.0kb downstream 2.0kb downstream 11708 true chr5: 2771962-2783669 Medicago truncatula
Medtr5g010420 2.0kb downstream 2.0kb downstream 2000 false chr5: 2771962-2773961 Medicago truncatula
Medtr5g010420 5.0kb upstream 5.0kb upstream 14708 true chr5: 2773962-2788669 Medicago truncatula
Medtr5g010420 5.0kb upstream 5.0kb upstream 5000 false chr5: 2783670-2788669 Medicago truncatula
Medtr5g010420 5.0kb downstream 5.0kb downstream 14708 true chr5: 2768962-2783669 Medicago truncatula
Medtr5g010420 5.0kb downstream 5.0kb downstream 5000 false chr5: 2768962-2773961 Medicago truncatula
Medtr5g010420 10.0kb upstream 10.0kb upstream 19708 true chr5: 2773962-2793669 Medicago truncatula
Medtr5g010420 10.0kb upstream 10.0kb upstream 10000 false chr5: 2783670-2793669 Medicago truncatula
Medtr5g010420 10.0kb downstream 10.0kb downstream 19708 true chr5: 2763962-2783669 Medicago truncatula
Medtr5g010420 10.0kb downstream 10.0kb downstream 10000 false chr5: 2763962-2773961 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308633 5265 Fabidae View MSA
124069663 5270 Rosid View MSA
123747003 5271 Pentapetalae View MSA
122794490 5272 Eudicot View MSA
122042760 5273 Angiosperm View MSA
121351146 5274 Embryophyte View MSA
123426796 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.29        
cufflinks 0.003     Low Low
cufflinks 0.362       High
cufflinks 0.107        
cufflinks 0.001     Low Low
cufflinks 0.074     Low  

0 Strain