Gene : Medtr5g015850 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21183 - RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATED Description:  39S ribosomal protein L47
Genomic Order:  830 Name:  ? Medtr5g015850
Secondary Identifier:  ? PAC:31091750
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g015850 0.5kb upstream 0.5kb upstream 1291 true chr5: 5568078-5569368 Medicago truncatula
Medtr5g015850 0.5kb upstream 0.5kb upstream 500 false chr5: 5568869-5569368 Medicago truncatula
Medtr5g015850 0.5kb downstream 0.5kb downstream 1291 true chr5: 5567578-5568868 Medicago truncatula
Medtr5g015850 0.5kb downstream 0.5kb downstream 500 false chr5: 5567578-5568077 Medicago truncatula
Medtr5g015850 1.0kb upstream 1.0kb upstream 1791 true chr5: 5568078-5569868 Medicago truncatula
Medtr5g015850 1.0kb upstream 1.0kb upstream 1000 false chr5: 5568869-5569868 Medicago truncatula
Medtr5g015850 1.0kb downstream 1.0kb downstream 1791 true chr5: 5567078-5568868 Medicago truncatula
Medtr5g015850 1.0kb downstream 1.0kb downstream 1000 false chr5: 5567078-5568077 Medicago truncatula
Medtr5g015850 2.0kb upstream 2.0kb upstream 2791 true chr5: 5568078-5570868 Medicago truncatula
Medtr5g015850 2.0kb upstream 2.0kb upstream 2000 false chr5: 5568869-5570868 Medicago truncatula
Medtr5g015850 2.0kb downstream 2.0kb downstream 2791 true chr5: 5566078-5568868 Medicago truncatula
Medtr5g015850 2.0kb downstream 2.0kb downstream 2000 false chr5: 5566078-5568077 Medicago truncatula
Medtr5g015850 5.0kb upstream 5.0kb upstream 5791 true chr5: 5568078-5573868 Medicago truncatula
Medtr5g015850 5.0kb upstream 5.0kb upstream 5000 false chr5: 5568869-5573868 Medicago truncatula
Medtr5g015850 5.0kb downstream 5.0kb downstream 5791 true chr5: 5563078-5568868 Medicago truncatula
Medtr5g015850 5.0kb downstream 5.0kb downstream 5000 false chr5: 5563078-5568077 Medicago truncatula
Medtr5g015850 10.0kb upstream 10.0kb upstream 10791 true chr5: 5568078-5578868 Medicago truncatula
Medtr5g015850 10.0kb upstream 10.0kb upstream 10000 false chr5: 5568869-5578868 Medicago truncatula
Medtr5g015850 10.0kb downstream 10.0kb downstream 10791 true chr5: 5558078-5568868 Medicago truncatula
Medtr5g015850 10.0kb downstream 10.0kb downstream 10000 false chr5: 5558078-5568077 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312546 5265 Fabidae View MSA
124065847 5270 Rosid View MSA
123748734 5271 Pentapetalae View MSA
122797701 5272 Eudicot View MSA
122044209 5273 Angiosperm View MSA
121343803 5274 Embryophyte View MSA
123425806 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.596        
cufflinks 5.163       Low
cufflinks 6.544        
cufflinks 13.407     High High
cufflinks 10.616     High  
cufflinks 12.23     High  
cufflinks 6.965        
cufflinks 6.06        
cufflinks 13.762     High High

0 Strain