Gene : Medtr5g015840 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21314:SF0 - UPF0553 PROTEIN C9ORF64 Description:  DUF2419 family protein
Genomic Order:  829 Name:  ? Medtr5g015840
Secondary Identifier:  ? PAC:31090107
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g015840 0.5kb upstream 0.5kb upstream 4824 true chr5: 5562106-5566929 Medicago truncatula
Medtr5g015840 0.5kb upstream 0.5kb upstream 500 false chr5: 5562106-5562605 Medicago truncatula
Medtr5g015840 0.5kb downstream 0.5kb downstream 4824 true chr5: 5562606-5567429 Medicago truncatula
Medtr5g015840 0.5kb downstream 0.5kb downstream 500 false chr5: 5566930-5567429 Medicago truncatula
Medtr5g015840 1.0kb upstream 1.0kb upstream 5324 true chr5: 5561606-5566929 Medicago truncatula
Medtr5g015840 1.0kb upstream 1.0kb upstream 1000 false chr5: 5561606-5562605 Medicago truncatula
Medtr5g015840 1.0kb downstream 1.0kb downstream 5324 true chr5: 5562606-5567929 Medicago truncatula
Medtr5g015840 1.0kb downstream 1.0kb downstream 1000 false chr5: 5566930-5567929 Medicago truncatula
Medtr5g015840 2.0kb upstream 2.0kb upstream 6324 true chr5: 5560606-5566929 Medicago truncatula
Medtr5g015840 2.0kb upstream 2.0kb upstream 2000 false chr5: 5560606-5562605 Medicago truncatula
Medtr5g015840 2.0kb downstream 2.0kb downstream 6324 true chr5: 5562606-5568929 Medicago truncatula
Medtr5g015840 2.0kb downstream 2.0kb downstream 2000 false chr5: 5566930-5568929 Medicago truncatula
Medtr5g015840 5.0kb upstream 5.0kb upstream 9324 true chr5: 5557606-5566929 Medicago truncatula
Medtr5g015840 5.0kb upstream 5.0kb upstream 5000 false chr5: 5557606-5562605 Medicago truncatula
Medtr5g015840 5.0kb downstream 5.0kb downstream 9324 true chr5: 5562606-5571929 Medicago truncatula
Medtr5g015840 5.0kb downstream 5.0kb downstream 5000 false chr5: 5566930-5571929 Medicago truncatula
Medtr5g015840 10.0kb upstream 10.0kb upstream 14324 true chr5: 5552606-5566929 Medicago truncatula
Medtr5g015840 10.0kb upstream 10.0kb upstream 10000 false chr5: 5552606-5562605 Medicago truncatula
Medtr5g015840 10.0kb downstream 10.0kb downstream 14324 true chr5: 5562606-5576929 Medicago truncatula
Medtr5g015840 10.0kb downstream 10.0kb downstream 10000 false chr5: 5566930-5576929 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312059 5265 Fabidae View MSA
124070821 5270 Rosid View MSA
123742373 5271 Pentapetalae View MSA
122795462 5272 Eudicot View MSA
122048860 5273 Angiosperm View MSA
121348381 5274 Embryophyte View MSA
123425708 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.435        
cufflinks 0.738        
cufflinks 0.688        
cufflinks 0.454        
cufflinks 1.844       High
cufflinks 0.138     Low Low
cufflinks 0.764        
cufflinks 0.871        
cufflinks 0.646        

0 Strain