Gene : Medtr5g010950 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23138:SF97 - NUCLEAR PORE COMPLEX PROTEIN NUP50 Description:  RanBP1 domain protein
Genomic Order:  492 Name:  ? Medtr5g010950
Secondary Identifier:  ? PAC:31090382
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g010950 0.5kb upstream 0.5kb upstream 7352 true chr5: 3041743-3049094 Medicago truncatula
Medtr5g010950 0.5kb upstream 0.5kb upstream 500 false chr5: 3041743-3042242 Medicago truncatula
Medtr5g010950 0.5kb downstream 0.5kb downstream 7352 true chr5: 3042243-3049594 Medicago truncatula
Medtr5g010950 0.5kb downstream 0.5kb downstream 500 false chr5: 3049095-3049594 Medicago truncatula
Medtr5g010950 1.0kb upstream 1.0kb upstream 7852 true chr5: 3041243-3049094 Medicago truncatula
Medtr5g010950 1.0kb upstream 1.0kb upstream 1000 false chr5: 3041243-3042242 Medicago truncatula
Medtr5g010950 1.0kb downstream 1.0kb downstream 7852 true chr5: 3042243-3050094 Medicago truncatula
Medtr5g010950 1.0kb downstream 1.0kb downstream 1000 false chr5: 3049095-3050094 Medicago truncatula
Medtr5g010950 2.0kb upstream 2.0kb upstream 8852 true chr5: 3040243-3049094 Medicago truncatula
Medtr5g010950 2.0kb upstream 2.0kb upstream 2000 false chr5: 3040243-3042242 Medicago truncatula
Medtr5g010950 2.0kb downstream 2.0kb downstream 8852 true chr5: 3042243-3051094 Medicago truncatula
Medtr5g010950 2.0kb downstream 2.0kb downstream 2000 false chr5: 3049095-3051094 Medicago truncatula
Medtr5g010950 5.0kb upstream 5.0kb upstream 11852 true chr5: 3037243-3049094 Medicago truncatula
Medtr5g010950 5.0kb upstream 5.0kb upstream 5000 false chr5: 3037243-3042242 Medicago truncatula
Medtr5g010950 5.0kb downstream 5.0kb downstream 11852 true chr5: 3042243-3054094 Medicago truncatula
Medtr5g010950 5.0kb downstream 5.0kb downstream 5000 false chr5: 3049095-3054094 Medicago truncatula
Medtr5g010950 10.0kb upstream 10.0kb upstream 16852 true chr5: 3032243-3049094 Medicago truncatula
Medtr5g010950 10.0kb upstream 10.0kb upstream 10000 false chr5: 3032243-3042242 Medicago truncatula
Medtr5g010950 10.0kb downstream 10.0kb downstream 16852 true chr5: 3042243-3059094 Medicago truncatula
Medtr5g010950 10.0kb downstream 10.0kb downstream 10000 false chr5: 3049095-3059094 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297674 5265 Fabidae View MSA
124070591 5270 Rosid View MSA
123739047 5271 Pentapetalae View MSA
122795467 5272 Eudicot View MSA
122048629 5273 Angiosperm View MSA
121344794 5274 Embryophyte View MSA
123425860 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.636        
cufflinks 0.733        
cufflinks 0.952        
cufflinks 0.839        
cufflinks 1.004       High
cufflinks 0.378       Low
cufflinks 0.647        
cufflinks 0.726        
cufflinks 0.752        

0 Strain