Gene : Medtr5g010680 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10015:SF169 - HEAT STRESS TRANSCRIPTION FACTOR B-2B Description:  heat shock transcription factor B2A
Genomic Order:  473 Name:  ? Medtr5g010680
Secondary Identifier:  ? PAC:31086858
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g010680 0.5kb upstream 0.5kb upstream 3364 true chr5: 2909108-2912471 Medicago truncatula
Medtr5g010680 0.5kb upstream 0.5kb upstream 500 false chr5: 2909108-2909607 Medicago truncatula
Medtr5g010680 0.5kb downstream 0.5kb downstream 3364 true chr5: 2909608-2912971 Medicago truncatula
Medtr5g010680 0.5kb downstream 0.5kb downstream 500 false chr5: 2912472-2912971 Medicago truncatula
Medtr5g010680 1.0kb upstream 1.0kb upstream 3864 true chr5: 2908608-2912471 Medicago truncatula
Medtr5g010680 1.0kb upstream 1.0kb upstream 1000 false chr5: 2908608-2909607 Medicago truncatula
Medtr5g010680 1.0kb downstream 1.0kb downstream 3864 true chr5: 2909608-2913471 Medicago truncatula
Medtr5g010680 1.0kb downstream 1.0kb downstream 1000 false chr5: 2912472-2913471 Medicago truncatula
Medtr5g010680 2.0kb upstream 2.0kb upstream 4864 true chr5: 2907608-2912471 Medicago truncatula
Medtr5g010680 2.0kb upstream 2.0kb upstream 2000 false chr5: 2907608-2909607 Medicago truncatula
Medtr5g010680 2.0kb downstream 2.0kb downstream 4864 true chr5: 2909608-2914471 Medicago truncatula
Medtr5g010680 2.0kb downstream 2.0kb downstream 2000 false chr5: 2912472-2914471 Medicago truncatula
Medtr5g010680 5.0kb upstream 5.0kb upstream 7864 true chr5: 2904608-2912471 Medicago truncatula
Medtr5g010680 5.0kb upstream 5.0kb upstream 5000 false chr5: 2904608-2909607 Medicago truncatula
Medtr5g010680 5.0kb downstream 5.0kb downstream 7864 true chr5: 2909608-2917471 Medicago truncatula
Medtr5g010680 5.0kb downstream 5.0kb downstream 5000 false chr5: 2912472-2917471 Medicago truncatula
Medtr5g010680 10.0kb upstream 10.0kb upstream 12864 true chr5: 2899608-2912471 Medicago truncatula
Medtr5g010680 10.0kb upstream 10.0kb upstream 10000 false chr5: 2899608-2909607 Medicago truncatula
Medtr5g010680 10.0kb downstream 10.0kb downstream 12864 true chr5: 2909608-2922471 Medicago truncatula
Medtr5g010680 10.0kb downstream 10.0kb downstream 10000 false chr5: 2912472-2922471 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305601 5265 Fabidae View MSA
124066248 5270 Rosid View MSA
123750823 5271 Pentapetalae View MSA
122797389 5272 Eudicot View MSA
122047819 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.986       High
cufflinks 3.507        
cufflinks 4.312        
cufflinks 3.564        
cufflinks 2.469       Low
cufflinks 2.248       Low
cufflinks 4.83        
cufflinks 5.326        
cufflinks 4.424        

0 Strain