Gene : Medtr5g010520 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG0978//KOG4421 - E3 ubiquitin ligase involved in syntaxin degradation // Uncharacterized conserved protein Description:  myosin heavy chain-like protein
Genomic Order:  456 Name:  ? Medtr5g010520
Secondary Identifier:  ? PAC:31091024
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g010520 0.5kb upstream 0.5kb upstream 5699 true chr5: 2828735-2834433 Medicago truncatula
Medtr5g010520 0.5kb upstream 0.5kb upstream 500 false chr5: 2833934-2834433 Medicago truncatula
Medtr5g010520 0.5kb downstream 0.5kb downstream 5699 true chr5: 2828235-2833933 Medicago truncatula
Medtr5g010520 0.5kb downstream 0.5kb downstream 500 false chr5: 2828235-2828734 Medicago truncatula
Medtr5g010520 1.0kb upstream 1.0kb upstream 6199 true chr5: 2828735-2834933 Medicago truncatula
Medtr5g010520 1.0kb upstream 1.0kb upstream 1000 false chr5: 2833934-2834933 Medicago truncatula
Medtr5g010520 1.0kb downstream 1.0kb downstream 6199 true chr5: 2827735-2833933 Medicago truncatula
Medtr5g010520 1.0kb downstream 1.0kb downstream 1000 false chr5: 2827735-2828734 Medicago truncatula
Medtr5g010520 2.0kb upstream 2.0kb upstream 7199 true chr5: 2828735-2835933 Medicago truncatula
Medtr5g010520 2.0kb upstream 2.0kb upstream 2000 false chr5: 2833934-2835933 Medicago truncatula
Medtr5g010520 2.0kb downstream 2.0kb downstream 7199 true chr5: 2826735-2833933 Medicago truncatula
Medtr5g010520 2.0kb downstream 2.0kb downstream 2000 false chr5: 2826735-2828734 Medicago truncatula
Medtr5g010520 5.0kb upstream 5.0kb upstream 10199 true chr5: 2828735-2838933 Medicago truncatula
Medtr5g010520 5.0kb upstream 5.0kb upstream 5000 false chr5: 2833934-2838933 Medicago truncatula
Medtr5g010520 5.0kb downstream 5.0kb downstream 10199 true chr5: 2823735-2833933 Medicago truncatula
Medtr5g010520 5.0kb downstream 5.0kb downstream 5000 false chr5: 2823735-2828734 Medicago truncatula
Medtr5g010520 10.0kb upstream 10.0kb upstream 15199 true chr5: 2828735-2843933 Medicago truncatula
Medtr5g010520 10.0kb upstream 10.0kb upstream 10000 false chr5: 2833934-2843933 Medicago truncatula
Medtr5g010520 10.0kb downstream 10.0kb downstream 15199 true chr5: 2818735-2833933 Medicago truncatula
Medtr5g010520 10.0kb downstream 10.0kb downstream 10000 false chr5: 2818735-2828734 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040955 5273 Angiosperm View MSA
122311542 5265 Fabidae View MSA
124066145 5270 Rosid View MSA
123747619 5271 Pentapetalae View MSA
122785648 5272 Eudicot View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.204        
cufflinks 0.87        
cufflinks 0.71        
cufflinks 0.048     Low Low
cufflinks 1.224       High
cufflinks 0.246        
cufflinks 0.115        
cufflinks 0.857        
cufflinks 0.171        

0 Strain