Gene : Medtr5g011460 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF10693 - Protein of unknown function (DUF2499) (DUF2499) Description:  ycf49-like protein
Genomic Order:  532 Name:  ? Medtr5g011460
Secondary Identifier:  ? PAC:31085882
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g011460 0.5kb upstream 0.5kb upstream 5009 true chr5: 3288443-3293451 Medicago truncatula
Medtr5g011460 0.5kb upstream 0.5kb upstream 500 false chr5: 3288443-3288942 Medicago truncatula
Medtr5g011460 0.5kb downstream 0.5kb downstream 5009 true chr5: 3288943-3293951 Medicago truncatula
Medtr5g011460 0.5kb downstream 0.5kb downstream 500 false chr5: 3293452-3293951 Medicago truncatula
Medtr5g011460 1.0kb upstream 1.0kb upstream 5509 true chr5: 3287943-3293451 Medicago truncatula
Medtr5g011460 1.0kb upstream 1.0kb upstream 1000 false chr5: 3287943-3288942 Medicago truncatula
Medtr5g011460 1.0kb downstream 1.0kb downstream 5509 true chr5: 3288943-3294451 Medicago truncatula
Medtr5g011460 1.0kb downstream 1.0kb downstream 1000 false chr5: 3293452-3294451 Medicago truncatula
Medtr5g011460 2.0kb upstream 2.0kb upstream 6509 true chr5: 3286943-3293451 Medicago truncatula
Medtr5g011460 2.0kb upstream 2.0kb upstream 2000 false chr5: 3286943-3288942 Medicago truncatula
Medtr5g011460 2.0kb downstream 2.0kb downstream 6509 true chr5: 3288943-3295451 Medicago truncatula
Medtr5g011460 2.0kb downstream 2.0kb downstream 2000 false chr5: 3293452-3295451 Medicago truncatula
Medtr5g011460 5.0kb upstream 5.0kb upstream 9509 true chr5: 3283943-3293451 Medicago truncatula
Medtr5g011460 5.0kb upstream 5.0kb upstream 5000 false chr5: 3283943-3288942 Medicago truncatula
Medtr5g011460 5.0kb downstream 5.0kb downstream 9509 true chr5: 3288943-3298451 Medicago truncatula
Medtr5g011460 5.0kb downstream 5.0kb downstream 5000 false chr5: 3293452-3298451 Medicago truncatula
Medtr5g011460 10.0kb upstream 10.0kb upstream 14509 true chr5: 3278943-3293451 Medicago truncatula
Medtr5g011460 10.0kb upstream 10.0kb upstream 10000 false chr5: 3278943-3288942 Medicago truncatula
Medtr5g011460 10.0kb downstream 10.0kb downstream 14509 true chr5: 3288943-3303451 Medicago truncatula
Medtr5g011460 10.0kb downstream 10.0kb downstream 10000 false chr5: 3293452-3303451 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309771 5265 Fabidae View MSA
124072298 5270 Rosid View MSA
123741098 5271 Pentapetalae View MSA
122793165 5272 Eudicot View MSA
122043045 5273 Angiosperm View MSA
121348068 5274 Embryophyte View MSA
123427826 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.513        
cufflinks 7.569       High
cufflinks 5.308        
cufflinks 0.508        
cufflinks 7.44       High
cufflinks 0.228       Low
cufflinks 0.773        
cufflinks 7.713       High
cufflinks 0.574        

0 Strain