Gene : Medtr5g012900 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11361:SF21 - MUTS PROTEIN HOMOLOG 4 Description:  DNA mismatch repair MSH4-like protein, putative
Genomic Order:  629 Name:  ? Medtr5g012900
Secondary Identifier:  ? PAC:31088895
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g012900 0.5kb upstream 0.5kb upstream 7897 true chr5: 3981730-3989626 Medicago truncatula
Medtr5g012900 0.5kb upstream 0.5kb upstream 500 false chr5: 3981730-3982229 Medicago truncatula
Medtr5g012900 0.5kb downstream 0.5kb downstream 7897 true chr5: 3982230-3990126 Medicago truncatula
Medtr5g012900 0.5kb downstream 0.5kb downstream 500 false chr5: 3989627-3990126 Medicago truncatula
Medtr5g012900 1.0kb upstream 1.0kb upstream 8397 true chr5: 3981230-3989626 Medicago truncatula
Medtr5g012900 1.0kb upstream 1.0kb upstream 1000 false chr5: 3981230-3982229 Medicago truncatula
Medtr5g012900 1.0kb downstream 1.0kb downstream 8397 true chr5: 3982230-3990626 Medicago truncatula
Medtr5g012900 1.0kb downstream 1.0kb downstream 1000 false chr5: 3989627-3990626 Medicago truncatula
Medtr5g012900 2.0kb upstream 2.0kb upstream 9397 true chr5: 3980230-3989626 Medicago truncatula
Medtr5g012900 2.0kb upstream 2.0kb upstream 2000 false chr5: 3980230-3982229 Medicago truncatula
Medtr5g012900 2.0kb downstream 2.0kb downstream 9397 true chr5: 3982230-3991626 Medicago truncatula
Medtr5g012900 2.0kb downstream 2.0kb downstream 2000 false chr5: 3989627-3991626 Medicago truncatula
Medtr5g012900 5.0kb upstream 5.0kb upstream 12397 true chr5: 3977230-3989626 Medicago truncatula
Medtr5g012900 5.0kb upstream 5.0kb upstream 5000 false chr5: 3977230-3982229 Medicago truncatula
Medtr5g012900 5.0kb downstream 5.0kb downstream 12397 true chr5: 3982230-3994626 Medicago truncatula
Medtr5g012900 5.0kb downstream 5.0kb downstream 5000 false chr5: 3989627-3994626 Medicago truncatula
Medtr5g012900 10.0kb upstream 10.0kb upstream 17397 true chr5: 3972230-3989626 Medicago truncatula
Medtr5g012900 10.0kb upstream 10.0kb upstream 10000 false chr5: 3972230-3982229 Medicago truncatula
Medtr5g012900 10.0kb downstream 10.0kb downstream 17397 true chr5: 3982230-3999626 Medicago truncatula
Medtr5g012900 10.0kb downstream 10.0kb downstream 10000 false chr5: 3989627-3999626 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306512 5265 Fabidae View MSA
124050311 5270 Rosid View MSA
123737053 5271 Pentapetalae View MSA
122788713 5272 Eudicot View MSA
122042795 5273 Angiosperm View MSA
121346371 5274 Embryophyte View MSA
123424062 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.005     Low Low
cufflinks 0.019     Low  
cufflinks 0.015     Low  
cufflinks 0.019     Low  
cufflinks 0.029     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.022     Low  
cufflinks 0.019     Low  

0 Strain