Gene : Medtr5g012920 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10909:SF250 - PEROXISOMAL ACYL-COENZYME A OXIDASE 2 Description:  peroxisomal acyl-coenzyme A oxidase-like protein
Genomic Order:  631 Name:  ? Medtr5g012920
Secondary Identifier:  ? PAC:31088540
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g012920 0.5kb upstream 0.5kb upstream 7639 true chr5: 4004454-4012092 Medicago truncatula
Medtr5g012920 0.5kb upstream 0.5kb upstream 500 false chr5: 4011593-4012092 Medicago truncatula
Medtr5g012920 0.5kb downstream 0.5kb downstream 7639 true chr5: 4003954-4011592 Medicago truncatula
Medtr5g012920 0.5kb downstream 0.5kb downstream 500 false chr5: 4003954-4004453 Medicago truncatula
Medtr5g012920 1.0kb upstream 1.0kb upstream 8139 true chr5: 4004454-4012592 Medicago truncatula
Medtr5g012920 1.0kb upstream 1.0kb upstream 1000 false chr5: 4011593-4012592 Medicago truncatula
Medtr5g012920 1.0kb downstream 1.0kb downstream 8139 true chr5: 4003454-4011592 Medicago truncatula
Medtr5g012920 1.0kb downstream 1.0kb downstream 1000 false chr5: 4003454-4004453 Medicago truncatula
Medtr5g012920 2.0kb upstream 2.0kb upstream 9139 true chr5: 4004454-4013592 Medicago truncatula
Medtr5g012920 2.0kb upstream 2.0kb upstream 2000 false chr5: 4011593-4013592 Medicago truncatula
Medtr5g012920 2.0kb downstream 2.0kb downstream 9139 true chr5: 4002454-4011592 Medicago truncatula
Medtr5g012920 2.0kb downstream 2.0kb downstream 2000 false chr5: 4002454-4004453 Medicago truncatula
Medtr5g012920 5.0kb upstream 5.0kb upstream 12139 true chr5: 4004454-4016592 Medicago truncatula
Medtr5g012920 5.0kb upstream 5.0kb upstream 5000 false chr5: 4011593-4016592 Medicago truncatula
Medtr5g012920 5.0kb downstream 5.0kb downstream 12139 true chr5: 3999454-4011592 Medicago truncatula
Medtr5g012920 5.0kb downstream 5.0kb downstream 5000 false chr5: 3999454-4004453 Medicago truncatula
Medtr5g012920 10.0kb upstream 10.0kb upstream 17139 true chr5: 4004454-4021592 Medicago truncatula
Medtr5g012920 10.0kb upstream 10.0kb upstream 10000 false chr5: 4011593-4021592 Medicago truncatula
Medtr5g012920 10.0kb downstream 10.0kb downstream 17139 true chr5: 3994454-4011592 Medicago truncatula
Medtr5g012920 10.0kb downstream 10.0kb downstream 10000 false chr5: 3994454-4004453 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309482 5265 Fabidae View MSA
124065660 5270 Rosid View MSA
123739070 5271 Pentapetalae View MSA
122787917 5272 Eudicot View MSA
122045798 5273 Angiosperm View MSA
121345655 5274 Embryophyte View MSA
123428216 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.313        
cufflinks 22.612     High High
cufflinks 8.839        
cufflinks 2.479       Low
cufflinks 8.507        
cufflinks 3.821       Low
cufflinks 19.398     High High
cufflinks 10.799     High  
cufflinks 16.535     High  

0 Strain