Gene : Medtr5g012390 M. truncatula Mt4.0v1
Defline:  (1 of 2) 1.1.1.27 - L-lactate dehydrogenase / L-lactic dehydrogenase Description:  L-lactate dehydrogenase A-like protein
Genomic Order:  594 Name:  ? Medtr5g012390
Secondary Identifier:  ? PAC:31087997
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula ANAEROFRUCAT-PWY Medicago truncatula pathologic  
Mtruncatula PWY-5481 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g012390 0.5kb upstream 0.5kb upstream 1887 true chr5: 3705145-3707031 Medicago truncatula
Medtr5g012390 0.5kb upstream 0.5kb upstream 500 false chr5: 3706532-3707031 Medicago truncatula
Medtr5g012390 0.5kb downstream 0.5kb downstream 1887 true chr5: 3704645-3706531 Medicago truncatula
Medtr5g012390 0.5kb downstream 0.5kb downstream 500 false chr5: 3704645-3705144 Medicago truncatula
Medtr5g012390 1.0kb upstream 1.0kb upstream 2387 true chr5: 3705145-3707531 Medicago truncatula
Medtr5g012390 1.0kb upstream 1.0kb upstream 1000 false chr5: 3706532-3707531 Medicago truncatula
Medtr5g012390 1.0kb downstream 1.0kb downstream 2387 true chr5: 3704145-3706531 Medicago truncatula
Medtr5g012390 1.0kb downstream 1.0kb downstream 1000 false chr5: 3704145-3705144 Medicago truncatula
Medtr5g012390 2.0kb upstream 2.0kb upstream 3387 true chr5: 3705145-3708531 Medicago truncatula
Medtr5g012390 2.0kb upstream 2.0kb upstream 2000 false chr5: 3706532-3708531 Medicago truncatula
Medtr5g012390 2.0kb downstream 2.0kb downstream 3387 true chr5: 3703145-3706531 Medicago truncatula
Medtr5g012390 2.0kb downstream 2.0kb downstream 2000 false chr5: 3703145-3705144 Medicago truncatula
Medtr5g012390 5.0kb upstream 5.0kb upstream 6387 true chr5: 3705145-3711531 Medicago truncatula
Medtr5g012390 5.0kb upstream 5.0kb upstream 5000 false chr5: 3706532-3711531 Medicago truncatula
Medtr5g012390 5.0kb downstream 5.0kb downstream 6387 true chr5: 3700145-3706531 Medicago truncatula
Medtr5g012390 5.0kb downstream 5.0kb downstream 5000 false chr5: 3700145-3705144 Medicago truncatula
Medtr5g012390 10.0kb upstream 10.0kb upstream 11387 true chr5: 3705145-3716531 Medicago truncatula
Medtr5g012390 10.0kb upstream 10.0kb upstream 10000 false chr5: 3706532-3716531 Medicago truncatula
Medtr5g012390 10.0kb downstream 10.0kb downstream 11387 true chr5: 3695145-3706531 Medicago truncatula
Medtr5g012390 10.0kb downstream 10.0kb downstream 10000 false chr5: 3695145-3705144 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302762 5265 Fabidae View MSA
124064441 5270 Rosid View MSA
123739146 5271 Pentapetalae View MSA
122785845 5272 Eudicot View MSA
122045770 5273 Angiosperm View MSA
121350532 5274 Embryophyte View MSA
123381776 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 98.643     High High
cufflinks 3.042        
cufflinks 1.002       Low
cufflinks 8.695        
cufflinks 0.998       Low
cufflinks 9.409        
cufflinks 40.79     High  
cufflinks 3.868        
cufflinks 48.207     High High

0 Strain