Gene : Medtr5g013300 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR15680:SF10 - 50S RIBOSOMAL PROTEIN L19-1, CHLOROPLASTIC-RELATED Description:  50S ribosomal protein L19-2
Genomic Order:  657 Name:  ? Medtr5g013300
Secondary Identifier:  ? PAC:31087195
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g013300 0.5kb upstream 0.5kb upstream 3659 true chr5: 4191762-4195420 Medicago truncatula
Medtr5g013300 0.5kb upstream 0.5kb upstream 500 false chr5: 4191762-4192261 Medicago truncatula
Medtr5g013300 0.5kb downstream 0.5kb downstream 3659 true chr5: 4192262-4195920 Medicago truncatula
Medtr5g013300 0.5kb downstream 0.5kb downstream 500 false chr5: 4195421-4195920 Medicago truncatula
Medtr5g013300 1.0kb upstream 1.0kb upstream 4159 true chr5: 4191262-4195420 Medicago truncatula
Medtr5g013300 1.0kb upstream 1.0kb upstream 1000 false chr5: 4191262-4192261 Medicago truncatula
Medtr5g013300 1.0kb downstream 1.0kb downstream 4159 true chr5: 4192262-4196420 Medicago truncatula
Medtr5g013300 1.0kb downstream 1.0kb downstream 1000 false chr5: 4195421-4196420 Medicago truncatula
Medtr5g013300 2.0kb upstream 2.0kb upstream 5159 true chr5: 4190262-4195420 Medicago truncatula
Medtr5g013300 2.0kb upstream 2.0kb upstream 2000 false chr5: 4190262-4192261 Medicago truncatula
Medtr5g013300 2.0kb downstream 2.0kb downstream 5159 true chr5: 4192262-4197420 Medicago truncatula
Medtr5g013300 2.0kb downstream 2.0kb downstream 2000 false chr5: 4195421-4197420 Medicago truncatula
Medtr5g013300 5.0kb upstream 5.0kb upstream 8159 true chr5: 4187262-4195420 Medicago truncatula
Medtr5g013300 5.0kb upstream 5.0kb upstream 5000 false chr5: 4187262-4192261 Medicago truncatula
Medtr5g013300 5.0kb downstream 5.0kb downstream 8159 true chr5: 4192262-4200420 Medicago truncatula
Medtr5g013300 5.0kb downstream 5.0kb downstream 5000 false chr5: 4195421-4200420 Medicago truncatula
Medtr5g013300 10.0kb upstream 10.0kb upstream 13159 true chr5: 4182262-4195420 Medicago truncatula
Medtr5g013300 10.0kb upstream 10.0kb upstream 10000 false chr5: 4182262-4192261 Medicago truncatula
Medtr5g013300 10.0kb downstream 10.0kb downstream 13159 true chr5: 4192262-4205420 Medicago truncatula
Medtr5g013300 10.0kb downstream 10.0kb downstream 10000 false chr5: 4195421-4205420 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309384 5265 Fabidae View MSA
124065733 5270 Rosid View MSA
123737610 5271 Pentapetalae View MSA
122789483 5272 Eudicot View MSA
122047909 5273 Angiosperm View MSA
123428995 5275 Viridiplantae View MSA
121349577 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.234        
cufflinks 33.047     High High
cufflinks 24.778     High  
cufflinks 4.198        
cufflinks 34.681     High High
cufflinks 2.691        
cufflinks 2.007       Low
cufflinks 29.522     High High
cufflinks 2.789        

0 Strain