Gene : Medtr5g013280 M. truncatula Mt4.0v1
Description:  transmembrane protein, putative Genomic Order:  655
Name:  ? Medtr5g013280 Secondary Identifier:  ? PAC:31091861
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g013280 0.5kb upstream 0.5kb upstream 5500 true chr5: 4181176-4186675 Medicago truncatula
Medtr5g013280 0.5kb upstream 0.5kb upstream 500 false chr5: 4181176-4181675 Medicago truncatula
Medtr5g013280 0.5kb downstream 0.5kb downstream 5500 true chr5: 4181676-4187175 Medicago truncatula
Medtr5g013280 0.5kb downstream 0.5kb downstream 500 false chr5: 4186676-4187175 Medicago truncatula
Medtr5g013280 1.0kb upstream 1.0kb upstream 6000 true chr5: 4180676-4186675 Medicago truncatula
Medtr5g013280 1.0kb upstream 1.0kb upstream 1000 false chr5: 4180676-4181675 Medicago truncatula
Medtr5g013280 1.0kb downstream 1.0kb downstream 6000 true chr5: 4181676-4187675 Medicago truncatula
Medtr5g013280 1.0kb downstream 1.0kb downstream 1000 false chr5: 4186676-4187675 Medicago truncatula
Medtr5g013280 2.0kb upstream 2.0kb upstream 7000 true chr5: 4179676-4186675 Medicago truncatula
Medtr5g013280 2.0kb upstream 2.0kb upstream 2000 false chr5: 4179676-4181675 Medicago truncatula
Medtr5g013280 2.0kb downstream 2.0kb downstream 7000 true chr5: 4181676-4188675 Medicago truncatula
Medtr5g013280 2.0kb downstream 2.0kb downstream 2000 false chr5: 4186676-4188675 Medicago truncatula
Medtr5g013280 5.0kb upstream 5.0kb upstream 10000 true chr5: 4176676-4186675 Medicago truncatula
Medtr5g013280 5.0kb upstream 5.0kb upstream 5000 false chr5: 4176676-4181675 Medicago truncatula
Medtr5g013280 5.0kb downstream 5.0kb downstream 10000 true chr5: 4181676-4191675 Medicago truncatula
Medtr5g013280 5.0kb downstream 5.0kb downstream 5000 false chr5: 4186676-4191675 Medicago truncatula
Medtr5g013280 10.0kb upstream 10.0kb upstream 15000 true chr5: 4171676-4186675 Medicago truncatula
Medtr5g013280 10.0kb upstream 10.0kb upstream 10000 false chr5: 4171676-4181675 Medicago truncatula
Medtr5g013280 10.0kb downstream 10.0kb downstream 15000 true chr5: 4181676-4196675 Medicago truncatula
Medtr5g013280 10.0kb downstream 10.0kb downstream 10000 false chr5: 4186676-4196675 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041519 5273 Angiosperm View MSA
122301264 5265 Fabidae View MSA
124070555 5270 Rosid View MSA
123738525 5271 Pentapetalae View MSA
122788017 5272 Eudicot View MSA
121351305 5274 Embryophyte View MSA
123426139 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.297        
cufflinks 0.698        
cufflinks 0.702        
cufflinks 0.257       Low
cufflinks 1.05       High
cufflinks 0.248       Low
cufflinks 0.318        
cufflinks 0.645        
cufflinks 0.317        

0 Strain