Gene : Medtr5g013040 M. truncatula Mt4.0v1
Defline:  (1 of 11) KOG0324 - Uncharacterized conserved protein Description:  PPPDE thiol peptidase family protein, putative
Genomic Order:  639 Name:  ? Medtr5g013040
Secondary Identifier:  ? PAC:31088648
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g013040 0.5kb upstream 0.5kb upstream 3694 true chr5: 4091411-4095104 Medicago truncatula
Medtr5g013040 0.5kb upstream 0.5kb upstream 500 false chr5: 4094605-4095104 Medicago truncatula
Medtr5g013040 0.5kb downstream 0.5kb downstream 3694 true chr5: 4090911-4094604 Medicago truncatula
Medtr5g013040 0.5kb downstream 0.5kb downstream 500 false chr5: 4090911-4091410 Medicago truncatula
Medtr5g013040 1.0kb upstream 1.0kb upstream 4194 true chr5: 4091411-4095604 Medicago truncatula
Medtr5g013040 1.0kb upstream 1.0kb upstream 1000 false chr5: 4094605-4095604 Medicago truncatula
Medtr5g013040 1.0kb downstream 1.0kb downstream 4194 true chr5: 4090411-4094604 Medicago truncatula
Medtr5g013040 1.0kb downstream 1.0kb downstream 1000 false chr5: 4090411-4091410 Medicago truncatula
Medtr5g013040 2.0kb upstream 2.0kb upstream 5194 true chr5: 4091411-4096604 Medicago truncatula
Medtr5g013040 2.0kb upstream 2.0kb upstream 2000 false chr5: 4094605-4096604 Medicago truncatula
Medtr5g013040 2.0kb downstream 2.0kb downstream 5194 true chr5: 4089411-4094604 Medicago truncatula
Medtr5g013040 2.0kb downstream 2.0kb downstream 2000 false chr5: 4089411-4091410 Medicago truncatula
Medtr5g013040 5.0kb upstream 5.0kb upstream 8194 true chr5: 4091411-4099604 Medicago truncatula
Medtr5g013040 5.0kb upstream 5.0kb upstream 5000 false chr5: 4094605-4099604 Medicago truncatula
Medtr5g013040 5.0kb downstream 5.0kb downstream 8194 true chr5: 4086411-4094604 Medicago truncatula
Medtr5g013040 5.0kb downstream 5.0kb downstream 5000 false chr5: 4086411-4091410 Medicago truncatula
Medtr5g013040 10.0kb upstream 10.0kb upstream 13194 true chr5: 4091411-4104604 Medicago truncatula
Medtr5g013040 10.0kb upstream 10.0kb upstream 10000 false chr5: 4094605-4104604 Medicago truncatula
Medtr5g013040 10.0kb downstream 10.0kb downstream 13194 true chr5: 4081411-4094604 Medicago truncatula
Medtr5g013040 10.0kb downstream 10.0kb downstream 10000 false chr5: 4081411-4091410 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314996 5265 Fabidae View MSA
124071036 5270 Rosid View MSA
123751052 5271 Pentapetalae View MSA
122794591 5272 Eudicot View MSA
122048592 5273 Angiosperm View MSA
123429049 5275 Viridiplantae View MSA
121350542 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.399        
cufflinks 1.626        
cufflinks 1.758        
cufflinks 0.753        
cufflinks 2.368       High
cufflinks 0.216       Low
cufflinks 0.517        
cufflinks 1.48        
cufflinks 0.515        

0 Strain