Gene : Medtr5g013030 M. truncatula Mt4.0v1
Description:  transmembrane protein, putative Genomic Order:  638
Name:  ? Medtr5g013030 Secondary Identifier:  ? PAC:31090294
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g013030 0.5kb upstream 0.5kb upstream 2399 true chr5: 4089073-4091471 Medicago truncatula
Medtr5g013030 0.5kb upstream 0.5kb upstream 500 false chr5: 4090972-4091471 Medicago truncatula
Medtr5g013030 0.5kb downstream 0.5kb downstream 2399 true chr5: 4088573-4090971 Medicago truncatula
Medtr5g013030 0.5kb downstream 0.5kb downstream 500 false chr5: 4088573-4089072 Medicago truncatula
Medtr5g013030 1.0kb upstream 1.0kb upstream 2899 true chr5: 4089073-4091971 Medicago truncatula
Medtr5g013030 1.0kb upstream 1.0kb upstream 1000 false chr5: 4090972-4091971 Medicago truncatula
Medtr5g013030 1.0kb downstream 1.0kb downstream 2899 true chr5: 4088073-4090971 Medicago truncatula
Medtr5g013030 1.0kb downstream 1.0kb downstream 1000 false chr5: 4088073-4089072 Medicago truncatula
Medtr5g013030 2.0kb upstream 2.0kb upstream 3899 true chr5: 4089073-4092971 Medicago truncatula
Medtr5g013030 2.0kb upstream 2.0kb upstream 2000 false chr5: 4090972-4092971 Medicago truncatula
Medtr5g013030 2.0kb downstream 2.0kb downstream 3899 true chr5: 4087073-4090971 Medicago truncatula
Medtr5g013030 2.0kb downstream 2.0kb downstream 2000 false chr5: 4087073-4089072 Medicago truncatula
Medtr5g013030 5.0kb upstream 5.0kb upstream 6899 true chr5: 4089073-4095971 Medicago truncatula
Medtr5g013030 5.0kb upstream 5.0kb upstream 5000 false chr5: 4090972-4095971 Medicago truncatula
Medtr5g013030 5.0kb downstream 5.0kb downstream 6899 true chr5: 4084073-4090971 Medicago truncatula
Medtr5g013030 5.0kb downstream 5.0kb downstream 5000 false chr5: 4084073-4089072 Medicago truncatula
Medtr5g013030 10.0kb upstream 10.0kb upstream 11899 true chr5: 4089073-4100971 Medicago truncatula
Medtr5g013030 10.0kb upstream 10.0kb upstream 10000 false chr5: 4090972-4100971 Medicago truncatula
Medtr5g013030 10.0kb downstream 10.0kb downstream 11899 true chr5: 4079073-4090971 Medicago truncatula
Medtr5g013030 10.0kb downstream 10.0kb downstream 10000 false chr5: 4079073-4089072 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310401 5265 Fabidae View MSA
124073839 5270 Rosid View MSA
123744072 5271 Pentapetalae View MSA
122770892 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.682        
cufflinks 4.294       Low
cufflinks 6.522        
cufflinks 13.128     High  
cufflinks 9.496        
cufflinks 26.148     High High
cufflinks 18.031     High  
cufflinks 4.913       Low
cufflinks 14.831     High  

0 Strain