Gene : Medtr5g021790 M. truncatula Mt4.0v1
Defline:  (1 of 84) PF13947 - Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind) Description:  wall-associated receptor kinase galacturonan-binding protein
Genomic Order:  1226 Name:  ? Medtr5g021790
Secondary Identifier:  ? PAC:31085931
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g021790 0.5kb upstream 0.5kb upstream 1491 true chr5: 8489341-8490831 Medicago truncatula
Medtr5g021790 0.5kb upstream 0.5kb upstream 500 false chr5: 8489341-8489840 Medicago truncatula
Medtr5g021790 0.5kb downstream 0.5kb downstream 1491 true chr5: 8489841-8491331 Medicago truncatula
Medtr5g021790 0.5kb downstream 0.5kb downstream 500 false chr5: 8490832-8491331 Medicago truncatula
Medtr5g021790 1.0kb upstream 1.0kb upstream 1991 true chr5: 8488841-8490831 Medicago truncatula
Medtr5g021790 1.0kb upstream 1.0kb upstream 1000 false chr5: 8488841-8489840 Medicago truncatula
Medtr5g021790 1.0kb downstream 1.0kb downstream 1991 true chr5: 8489841-8491831 Medicago truncatula
Medtr5g021790 1.0kb downstream 1.0kb downstream 1000 false chr5: 8490832-8491831 Medicago truncatula
Medtr5g021790 2.0kb upstream 2.0kb upstream 2991 true chr5: 8487841-8490831 Medicago truncatula
Medtr5g021790 2.0kb upstream 2.0kb upstream 2000 false chr5: 8487841-8489840 Medicago truncatula
Medtr5g021790 2.0kb downstream 2.0kb downstream 2991 true chr5: 8489841-8492831 Medicago truncatula
Medtr5g021790 2.0kb downstream 2.0kb downstream 2000 false chr5: 8490832-8492831 Medicago truncatula
Medtr5g021790 5.0kb upstream 5.0kb upstream 5991 true chr5: 8484841-8490831 Medicago truncatula
Medtr5g021790 5.0kb upstream 5.0kb upstream 5000 false chr5: 8484841-8489840 Medicago truncatula
Medtr5g021790 5.0kb downstream 5.0kb downstream 5991 true chr5: 8489841-8495831 Medicago truncatula
Medtr5g021790 5.0kb downstream 5.0kb downstream 5000 false chr5: 8490832-8495831 Medicago truncatula
Medtr5g021790 10.0kb upstream 10.0kb upstream 10991 true chr5: 8479841-8490831 Medicago truncatula
Medtr5g021790 10.0kb upstream 10.0kb upstream 10000 false chr5: 8479841-8489840 Medicago truncatula
Medtr5g021790 10.0kb downstream 10.0kb downstream 10991 true chr5: 8489841-8500831 Medicago truncatula
Medtr5g021790 10.0kb downstream 10.0kb downstream 10000 false chr5: 8490832-8500831 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315084 5265 Fabidae View MSA
124036944 5270 Rosid View MSA
123751004 5271 Pentapetalae View MSA
122794811 5272 Eudicot View MSA
122051146 5273 Angiosperm View MSA
121312314 5274 Embryophyte View MSA
123349498 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain