Gene : Medtr5g015020 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11751:SF431 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4-RELATED Description:  1-aminocyclopropane-1-carboxylate synthase
Genomic Order:  778 Name:  ? Medtr5g015020
Secondary Identifier:  ? PAC:31091670
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula ETHYL-PWY Medicago truncatula pathologic  
Mtruncatula PWY-7270 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g015020 0.5kb upstream 0.5kb upstream 2683 true chr5: 5133748-5136430 Medicago truncatula
Medtr5g015020 0.5kb upstream 0.5kb upstream 500 false chr5: 5135931-5136430 Medicago truncatula
Medtr5g015020 0.5kb downstream 0.5kb downstream 2683 true chr5: 5133248-5135930 Medicago truncatula
Medtr5g015020 0.5kb downstream 0.5kb downstream 500 false chr5: 5133248-5133747 Medicago truncatula
Medtr5g015020 1.0kb upstream 1.0kb upstream 3183 true chr5: 5133748-5136930 Medicago truncatula
Medtr5g015020 1.0kb upstream 1.0kb upstream 1000 false chr5: 5135931-5136930 Medicago truncatula
Medtr5g015020 1.0kb downstream 1.0kb downstream 3183 true chr5: 5132748-5135930 Medicago truncatula
Medtr5g015020 1.0kb downstream 1.0kb downstream 1000 false chr5: 5132748-5133747 Medicago truncatula
Medtr5g015020 2.0kb upstream 2.0kb upstream 4183 true chr5: 5133748-5137930 Medicago truncatula
Medtr5g015020 2.0kb upstream 2.0kb upstream 2000 false chr5: 5135931-5137930 Medicago truncatula
Medtr5g015020 2.0kb downstream 2.0kb downstream 4183 true chr5: 5131748-5135930 Medicago truncatula
Medtr5g015020 2.0kb downstream 2.0kb downstream 2000 false chr5: 5131748-5133747 Medicago truncatula
Medtr5g015020 5.0kb upstream 5.0kb upstream 7183 true chr5: 5133748-5140930 Medicago truncatula
Medtr5g015020 5.0kb upstream 5.0kb upstream 5000 false chr5: 5135931-5140930 Medicago truncatula
Medtr5g015020 5.0kb downstream 5.0kb downstream 7183 true chr5: 5128748-5135930 Medicago truncatula
Medtr5g015020 5.0kb downstream 5.0kb downstream 5000 false chr5: 5128748-5133747 Medicago truncatula
Medtr5g015020 10.0kb upstream 10.0kb upstream 12183 true chr5: 5133748-5145930 Medicago truncatula
Medtr5g015020 10.0kb upstream 10.0kb upstream 10000 false chr5: 5135931-5145930 Medicago truncatula
Medtr5g015020 10.0kb downstream 10.0kb downstream 12183 true chr5: 5123748-5135930 Medicago truncatula
Medtr5g015020 10.0kb downstream 10.0kb downstream 10000 false chr5: 5123748-5133747 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313200 5265 Fabidae View MSA
124066319 5270 Rosid View MSA
123745403 5271 Pentapetalae View MSA
122791160 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.951        
cufflinks 3.346        
cufflinks 2.043        
cufflinks 2.06        
cufflinks 0.662       Low
cufflinks 2.199        
cufflinks 13.698     High High
cufflinks 3.5        
cufflinks 31.234     High High

0 Strain