Gene : Medtr5g007870 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21262//PTHR21262:SF7 - GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE Description:  RelA/SpoT-like protein RSH2
Genomic Order:  253 Name:  ? Medtr5g007870
Secondary Identifier:  ? PAC:31088483
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g007870 0.5kb upstream 0.5kb upstream 13713 true chr5: 1558274-1571986 Medicago truncatula
Medtr5g007870 0.5kb upstream 0.5kb upstream 500 false chr5: 1558274-1558773 Medicago truncatula
Medtr5g007870 0.5kb downstream 0.5kb downstream 13713 true chr5: 1558774-1572486 Medicago truncatula
Medtr5g007870 0.5kb downstream 0.5kb downstream 500 false chr5: 1571987-1572486 Medicago truncatula
Medtr5g007870 1.0kb upstream 1.0kb upstream 14213 true chr5: 1557774-1571986 Medicago truncatula
Medtr5g007870 1.0kb upstream 1.0kb upstream 1000 false chr5: 1557774-1558773 Medicago truncatula
Medtr5g007870 1.0kb downstream 1.0kb downstream 14213 true chr5: 1558774-1572986 Medicago truncatula
Medtr5g007870 1.0kb downstream 1.0kb downstream 1000 false chr5: 1571987-1572986 Medicago truncatula
Medtr5g007870 2.0kb upstream 2.0kb upstream 15213 true chr5: 1556774-1571986 Medicago truncatula
Medtr5g007870 2.0kb upstream 2.0kb upstream 2000 false chr5: 1556774-1558773 Medicago truncatula
Medtr5g007870 2.0kb downstream 2.0kb downstream 15213 true chr5: 1558774-1573986 Medicago truncatula
Medtr5g007870 2.0kb downstream 2.0kb downstream 2000 false chr5: 1571987-1573986 Medicago truncatula
Medtr5g007870 5.0kb upstream 5.0kb upstream 18213 true chr5: 1553774-1571986 Medicago truncatula
Medtr5g007870 5.0kb upstream 5.0kb upstream 5000 false chr5: 1553774-1558773 Medicago truncatula
Medtr5g007870 5.0kb downstream 5.0kb downstream 18213 true chr5: 1558774-1576986 Medicago truncatula
Medtr5g007870 5.0kb downstream 5.0kb downstream 5000 false chr5: 1571987-1576986 Medicago truncatula
Medtr5g007870 10.0kb upstream 10.0kb upstream 23213 true chr5: 1548774-1571986 Medicago truncatula
Medtr5g007870 10.0kb upstream 10.0kb upstream 10000 false chr5: 1548774-1558773 Medicago truncatula
Medtr5g007870 10.0kb downstream 10.0kb downstream 23213 true chr5: 1558774-1581986 Medicago truncatula
Medtr5g007870 10.0kb downstream 10.0kb downstream 10000 false chr5: 1571987-1581986 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302429 5265 Fabidae View MSA
124070563 5270 Rosid View MSA
123742389 5271 Pentapetalae View MSA
122794554 5272 Eudicot View MSA
122048422 5273 Angiosperm View MSA
121348424 5274 Embryophyte View MSA
123425764 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.732        
cufflinks 5.829       High
cufflinks 3.765        
cufflinks 0.279       Low
cufflinks 5.002       High
cufflinks 0.245       Low
cufflinks 0.342        
cufflinks 4.786       High
cufflinks 0.395        

0 Strain