Gene : Medtr5g008550 M. truncatula Mt4.0v1
Defline:  (1 of 209) PF00847 - AP2 domain (AP2) Description:  ethylene response factor
Genomic Order:  302 Name:  ? Medtr5g008550
Secondary Identifier:  ? PAC:31087751
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g008550 0.5kb upstream 0.5kb upstream 1082 true chr5: 1814617-1815698 Medicago truncatula
Medtr5g008550 0.5kb upstream 0.5kb upstream 500 false chr5: 1815199-1815698 Medicago truncatula
Medtr5g008550 0.5kb downstream 0.5kb downstream 1082 true chr5: 1814117-1815198 Medicago truncatula
Medtr5g008550 0.5kb downstream 0.5kb downstream 500 false chr5: 1814117-1814616 Medicago truncatula
Medtr5g008550 1.0kb upstream 1.0kb upstream 1582 true chr5: 1814617-1816198 Medicago truncatula
Medtr5g008550 1.0kb upstream 1.0kb upstream 1000 false chr5: 1815199-1816198 Medicago truncatula
Medtr5g008550 1.0kb downstream 1.0kb downstream 1582 true chr5: 1813617-1815198 Medicago truncatula
Medtr5g008550 1.0kb downstream 1.0kb downstream 1000 false chr5: 1813617-1814616 Medicago truncatula
Medtr5g008550 2.0kb upstream 2.0kb upstream 2582 true chr5: 1814617-1817198 Medicago truncatula
Medtr5g008550 2.0kb upstream 2.0kb upstream 2000 false chr5: 1815199-1817198 Medicago truncatula
Medtr5g008550 2.0kb downstream 2.0kb downstream 2582 true chr5: 1812617-1815198 Medicago truncatula
Medtr5g008550 2.0kb downstream 2.0kb downstream 2000 false chr5: 1812617-1814616 Medicago truncatula
Medtr5g008550 5.0kb upstream 5.0kb upstream 5582 true chr5: 1814617-1820198 Medicago truncatula
Medtr5g008550 5.0kb upstream 5.0kb upstream 5000 false chr5: 1815199-1820198 Medicago truncatula
Medtr5g008550 5.0kb downstream 5.0kb downstream 5582 true chr5: 1809617-1815198 Medicago truncatula
Medtr5g008550 5.0kb downstream 5.0kb downstream 5000 false chr5: 1809617-1814616 Medicago truncatula
Medtr5g008550 10.0kb upstream 10.0kb upstream 10582 true chr5: 1814617-1825198 Medicago truncatula
Medtr5g008550 10.0kb upstream 10.0kb upstream 10000 false chr5: 1815199-1825198 Medicago truncatula
Medtr5g008550 10.0kb downstream 10.0kb downstream 10582 true chr5: 1804617-1815198 Medicago truncatula
Medtr5g008550 10.0kb downstream 10.0kb downstream 10000 false chr5: 1804617-1814616 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312584 5265 Fabidae View MSA
124073354 5270 Rosid View MSA
123741897 5271 Pentapetalae View MSA
122793297 5272 Eudicot View MSA
122049485 5273 Angiosperm View MSA
121351578 5274 Embryophyte View MSA
123382234 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.438        
cufflinks 0.026     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.778        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.874        

0 Strain