Gene : Medtr5g015300 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR30602 - AMINO-ACID ACETYLTRANSFERASE Description:  N-acetyl-glutamate synthase
Genomic Order:  794 Name:  ? Medtr5g015300
Secondary Identifier:  ? PAC:31085737
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula ARGSYNBSUB-PWY Medicago truncatula pathologic  
Mtruncatula ARGSYN-PWY Medicago truncatula pathologic  
Mtruncatula GLUTORN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g015300 0.5kb upstream 0.5kb upstream 5675 true chr5: 5282909-5288583 Medicago truncatula
Medtr5g015300 0.5kb upstream 0.5kb upstream 500 false chr5: 5282909-5283408 Medicago truncatula
Medtr5g015300 0.5kb downstream 0.5kb downstream 5675 true chr5: 5283409-5289083 Medicago truncatula
Medtr5g015300 0.5kb downstream 0.5kb downstream 500 false chr5: 5288584-5289083 Medicago truncatula
Medtr5g015300 1.0kb upstream 1.0kb upstream 6175 true chr5: 5282409-5288583 Medicago truncatula
Medtr5g015300 1.0kb upstream 1.0kb upstream 1000 false chr5: 5282409-5283408 Medicago truncatula
Medtr5g015300 1.0kb downstream 1.0kb downstream 6175 true chr5: 5283409-5289583 Medicago truncatula
Medtr5g015300 1.0kb downstream 1.0kb downstream 1000 false chr5: 5288584-5289583 Medicago truncatula
Medtr5g015300 2.0kb upstream 2.0kb upstream 7175 true chr5: 5281409-5288583 Medicago truncatula
Medtr5g015300 2.0kb upstream 2.0kb upstream 2000 false chr5: 5281409-5283408 Medicago truncatula
Medtr5g015300 2.0kb downstream 2.0kb downstream 7175 true chr5: 5283409-5290583 Medicago truncatula
Medtr5g015300 2.0kb downstream 2.0kb downstream 2000 false chr5: 5288584-5290583 Medicago truncatula
Medtr5g015300 5.0kb upstream 5.0kb upstream 10175 true chr5: 5278409-5288583 Medicago truncatula
Medtr5g015300 5.0kb upstream 5.0kb upstream 5000 false chr5: 5278409-5283408 Medicago truncatula
Medtr5g015300 5.0kb downstream 5.0kb downstream 10175 true chr5: 5283409-5293583 Medicago truncatula
Medtr5g015300 5.0kb downstream 5.0kb downstream 5000 false chr5: 5288584-5293583 Medicago truncatula
Medtr5g015300 10.0kb upstream 10.0kb upstream 15175 true chr5: 5273409-5288583 Medicago truncatula
Medtr5g015300 10.0kb upstream 10.0kb upstream 10000 false chr5: 5273409-5283408 Medicago truncatula
Medtr5g015300 10.0kb downstream 10.0kb downstream 15175 true chr5: 5283409-5298583 Medicago truncatula
Medtr5g015300 10.0kb downstream 10.0kb downstream 10000 false chr5: 5288584-5298583 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311527 5265 Fabidae View MSA
124071227 5270 Rosid View MSA
123741250 5271 Pentapetalae View MSA
122788780 5272 Eudicot View MSA
122042495 5273 Angiosperm View MSA
121347122 5274 Embryophyte View MSA
123426582 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.697        
cufflinks 5.162        
cufflinks 7.816       High
cufflinks 0.57       Low
cufflinks 8.602       High
cufflinks 0.451       Low
cufflinks 2.32        
cufflinks 5.58        
cufflinks 2.054        

0 Strain