Gene : Medtr5g015280 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF10225 - Uncharacterized conserved protein (DUF2215) (DUF2215) Description:  transmembrane protein, putative
Genomic Order:  792 Name:  ? Medtr5g015280
Secondary Identifier:  ? PAC:31090630
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g015280 0.5kb upstream 0.5kb upstream 7035 true chr5: 5272865-5279899 Medicago truncatula
Medtr5g015280 0.5kb upstream 0.5kb upstream 500 false chr5: 5272865-5273364 Medicago truncatula
Medtr5g015280 0.5kb downstream 0.5kb downstream 7035 true chr5: 5273365-5280399 Medicago truncatula
Medtr5g015280 0.5kb downstream 0.5kb downstream 500 false chr5: 5279900-5280399 Medicago truncatula
Medtr5g015280 1.0kb upstream 1.0kb upstream 7535 true chr5: 5272365-5279899 Medicago truncatula
Medtr5g015280 1.0kb upstream 1.0kb upstream 1000 false chr5: 5272365-5273364 Medicago truncatula
Medtr5g015280 1.0kb downstream 1.0kb downstream 7535 true chr5: 5273365-5280899 Medicago truncatula
Medtr5g015280 1.0kb downstream 1.0kb downstream 1000 false chr5: 5279900-5280899 Medicago truncatula
Medtr5g015280 2.0kb upstream 2.0kb upstream 8535 true chr5: 5271365-5279899 Medicago truncatula
Medtr5g015280 2.0kb upstream 2.0kb upstream 2000 false chr5: 5271365-5273364 Medicago truncatula
Medtr5g015280 2.0kb downstream 2.0kb downstream 8535 true chr5: 5273365-5281899 Medicago truncatula
Medtr5g015280 2.0kb downstream 2.0kb downstream 2000 false chr5: 5279900-5281899 Medicago truncatula
Medtr5g015280 5.0kb upstream 5.0kb upstream 11535 true chr5: 5268365-5279899 Medicago truncatula
Medtr5g015280 5.0kb upstream 5.0kb upstream 5000 false chr5: 5268365-5273364 Medicago truncatula
Medtr5g015280 5.0kb downstream 5.0kb downstream 11535 true chr5: 5273365-5284899 Medicago truncatula
Medtr5g015280 5.0kb downstream 5.0kb downstream 5000 false chr5: 5279900-5284899 Medicago truncatula
Medtr5g015280 10.0kb upstream 10.0kb upstream 16535 true chr5: 5263365-5279899 Medicago truncatula
Medtr5g015280 10.0kb upstream 10.0kb upstream 10000 false chr5: 5263365-5273364 Medicago truncatula
Medtr5g015280 10.0kb downstream 10.0kb downstream 16535 true chr5: 5273365-5289899 Medicago truncatula
Medtr5g015280 10.0kb downstream 10.0kb downstream 10000 false chr5: 5279900-5289899 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302030 5265 Fabidae View MSA
124050479 5270 Rosid View MSA
123740101 5271 Pentapetalae View MSA
122787191 5272 Eudicot View MSA
122042001 5273 Angiosperm View MSA
121348772 5274 Embryophyte View MSA
123381008 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.055     Low Low
cufflinks 0.13        
cufflinks 0.085        
cufflinks 0.067     Low  
cufflinks 0.193       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.072        
cufflinks 0.091        
cufflinks 0.199       High

0 Strain