Gene : Medtr5g015260 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31311:SF3 - GLYCOSYLTRANSFERASE 6-RELATED Description:  galactosyl transferase GMA12/MNN10 family protein
Genomic Order:  790 Name:  ? Medtr5g015260
Secondary Identifier:  ? PAC:31087178
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5936 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g015260 0.5kb upstream 0.5kb upstream 2676 true chr5: 5260836-5263511 Medicago truncatula
Medtr5g015260 0.5kb upstream 0.5kb upstream 500 false chr5: 5263012-5263511 Medicago truncatula
Medtr5g015260 0.5kb downstream 0.5kb downstream 2676 true chr5: 5260336-5263011 Medicago truncatula
Medtr5g015260 0.5kb downstream 0.5kb downstream 500 false chr5: 5260336-5260835 Medicago truncatula
Medtr5g015260 1.0kb upstream 1.0kb upstream 3176 true chr5: 5260836-5264011 Medicago truncatula
Medtr5g015260 1.0kb upstream 1.0kb upstream 1000 false chr5: 5263012-5264011 Medicago truncatula
Medtr5g015260 1.0kb downstream 1.0kb downstream 3176 true chr5: 5259836-5263011 Medicago truncatula
Medtr5g015260 1.0kb downstream 1.0kb downstream 1000 false chr5: 5259836-5260835 Medicago truncatula
Medtr5g015260 2.0kb upstream 2.0kb upstream 4176 true chr5: 5260836-5265011 Medicago truncatula
Medtr5g015260 2.0kb upstream 2.0kb upstream 2000 false chr5: 5263012-5265011 Medicago truncatula
Medtr5g015260 2.0kb downstream 2.0kb downstream 4176 true chr5: 5258836-5263011 Medicago truncatula
Medtr5g015260 2.0kb downstream 2.0kb downstream 2000 false chr5: 5258836-5260835 Medicago truncatula
Medtr5g015260 5.0kb upstream 5.0kb upstream 7176 true chr5: 5260836-5268011 Medicago truncatula
Medtr5g015260 5.0kb upstream 5.0kb upstream 5000 false chr5: 5263012-5268011 Medicago truncatula
Medtr5g015260 5.0kb downstream 5.0kb downstream 7176 true chr5: 5255836-5263011 Medicago truncatula
Medtr5g015260 5.0kb downstream 5.0kb downstream 5000 false chr5: 5255836-5260835 Medicago truncatula
Medtr5g015260 10.0kb upstream 10.0kb upstream 12176 true chr5: 5260836-5273011 Medicago truncatula
Medtr5g015260 10.0kb upstream 10.0kb upstream 10000 false chr5: 5263012-5273011 Medicago truncatula
Medtr5g015260 10.0kb downstream 10.0kb downstream 12176 true chr5: 5250836-5263011 Medicago truncatula
Medtr5g015260 10.0kb downstream 10.0kb downstream 10000 false chr5: 5250836-5260835 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041044 5273 Angiosperm View MSA
122302131 5265 Fabidae View MSA
124070170 5270 Rosid View MSA
123745893 5271 Pentapetalae View MSA
122788546 5272 Eudicot View MSA
121352143 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.228        
cufflinks 0.878        
cufflinks 0.864        
cufflinks 0.5       Low
cufflinks 1.299        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.814        
cufflinks 0.613        
cufflinks 3.243       High

0 Strain