Gene : Medtr5g009830 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24349:SF95 - CALCIUM-DEPENDENT PROTEIN KINASE 3 Description:  calmodulin-domain kinase CDPK protein
Genomic Order:  403 Name:  ? Medtr5g009830
Secondary Identifier:  ? PAC:31086214
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g009830 0.5kb upstream 0.5kb upstream 5706 true chr5: 2477709-2483414 Medicago truncatula
Medtr5g009830 0.5kb upstream 0.5kb upstream 500 false chr5: 2477709-2478208 Medicago truncatula
Medtr5g009830 0.5kb downstream 0.5kb downstream 5706 true chr5: 2478209-2483914 Medicago truncatula
Medtr5g009830 0.5kb downstream 0.5kb downstream 500 false chr5: 2483415-2483914 Medicago truncatula
Medtr5g009830 1.0kb upstream 1.0kb upstream 6206 true chr5: 2477209-2483414 Medicago truncatula
Medtr5g009830 1.0kb upstream 1.0kb upstream 1000 false chr5: 2477209-2478208 Medicago truncatula
Medtr5g009830 1.0kb downstream 1.0kb downstream 6206 true chr5: 2478209-2484414 Medicago truncatula
Medtr5g009830 1.0kb downstream 1.0kb downstream 1000 false chr5: 2483415-2484414 Medicago truncatula
Medtr5g009830 2.0kb upstream 2.0kb upstream 7206 true chr5: 2476209-2483414 Medicago truncatula
Medtr5g009830 2.0kb upstream 2.0kb upstream 2000 false chr5: 2476209-2478208 Medicago truncatula
Medtr5g009830 2.0kb downstream 2.0kb downstream 7206 true chr5: 2478209-2485414 Medicago truncatula
Medtr5g009830 2.0kb downstream 2.0kb downstream 2000 false chr5: 2483415-2485414 Medicago truncatula
Medtr5g009830 5.0kb upstream 5.0kb upstream 10206 true chr5: 2473209-2483414 Medicago truncatula
Medtr5g009830 5.0kb upstream 5.0kb upstream 5000 false chr5: 2473209-2478208 Medicago truncatula
Medtr5g009830 5.0kb downstream 5.0kb downstream 10206 true chr5: 2478209-2488414 Medicago truncatula
Medtr5g009830 5.0kb downstream 5.0kb downstream 5000 false chr5: 2483415-2488414 Medicago truncatula
Medtr5g009830 10.0kb upstream 10.0kb upstream 15206 true chr5: 2468209-2483414 Medicago truncatula
Medtr5g009830 10.0kb upstream 10.0kb upstream 10000 false chr5: 2468209-2478208 Medicago truncatula
Medtr5g009830 10.0kb downstream 10.0kb downstream 15206 true chr5: 2478209-2493414 Medicago truncatula
Medtr5g009830 10.0kb downstream 10.0kb downstream 10000 false chr5: 2483415-2493414 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295758 5265 Fabidae View MSA
124061740 5270 Rosid View MSA
123741136 5271 Pentapetalae View MSA
122788703 5272 Eudicot View MSA
122043516 5273 Angiosperm View MSA
121349479 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.523        
cufflinks 4.595        
cufflinks 3.099        
cufflinks 3.554        
cufflinks 2.633       Low
cufflinks 2.658       Low
cufflinks 4.19        
cufflinks 3.062        
cufflinks 7.098       High

0 Strain