Gene : Medtr5g009920 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10782:SF4 - SUPPRESSOR OF VARIEGATION 2-10, ISOFORM I Description:  transcription factor-like protein
Genomic Order:  407 Name:  ? Medtr5g009920
Secondary Identifier:  ? PAC:31088337
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g009920 0.5kb upstream 0.5kb upstream 11059 true chr5: 2533530-2544588 Medicago truncatula
Medtr5g009920 0.5kb upstream 0.5kb upstream 500 false chr5: 2533530-2534029 Medicago truncatula
Medtr5g009920 0.5kb downstream 0.5kb downstream 11059 true chr5: 2534030-2545088 Medicago truncatula
Medtr5g009920 0.5kb downstream 0.5kb downstream 500 false chr5: 2544589-2545088 Medicago truncatula
Medtr5g009920 1.0kb upstream 1.0kb upstream 11559 true chr5: 2533030-2544588 Medicago truncatula
Medtr5g009920 1.0kb upstream 1.0kb upstream 1000 false chr5: 2533030-2534029 Medicago truncatula
Medtr5g009920 1.0kb downstream 1.0kb downstream 11559 true chr5: 2534030-2545588 Medicago truncatula
Medtr5g009920 1.0kb downstream 1.0kb downstream 1000 false chr5: 2544589-2545588 Medicago truncatula
Medtr5g009920 2.0kb upstream 2.0kb upstream 12559 true chr5: 2532030-2544588 Medicago truncatula
Medtr5g009920 2.0kb upstream 2.0kb upstream 2000 false chr5: 2532030-2534029 Medicago truncatula
Medtr5g009920 2.0kb downstream 2.0kb downstream 12559 true chr5: 2534030-2546588 Medicago truncatula
Medtr5g009920 2.0kb downstream 2.0kb downstream 2000 false chr5: 2544589-2546588 Medicago truncatula
Medtr5g009920 5.0kb upstream 5.0kb upstream 15559 true chr5: 2529030-2544588 Medicago truncatula
Medtr5g009920 5.0kb upstream 5.0kb upstream 5000 false chr5: 2529030-2534029 Medicago truncatula
Medtr5g009920 5.0kb downstream 5.0kb downstream 15559 true chr5: 2534030-2549588 Medicago truncatula
Medtr5g009920 5.0kb downstream 5.0kb downstream 5000 false chr5: 2544589-2549588 Medicago truncatula
Medtr5g009920 10.0kb upstream 10.0kb upstream 20559 true chr5: 2524030-2544588 Medicago truncatula
Medtr5g009920 10.0kb upstream 10.0kb upstream 10000 false chr5: 2524030-2534029 Medicago truncatula
Medtr5g009920 10.0kb downstream 10.0kb downstream 20559 true chr5: 2534030-2554588 Medicago truncatula
Medtr5g009920 10.0kb downstream 10.0kb downstream 10000 false chr5: 2544589-2554588 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302003 5265 Fabidae View MSA
124062957 5270 Rosid View MSA
123737680 5271 Pentapetalae View MSA
122797749 5272 Eudicot View MSA
122050924 5273 Angiosperm View MSA
121346660 5274 Embryophyte View MSA
123426833 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.542       High
cufflinks 0.631        
cufflinks 0.55        
cufflinks 0.441        
cufflinks 0.61        
cufflinks 0.363       Low
cufflinks 1.83       High
cufflinks 0.364       Low
cufflinks 1.907       High

0 Strain