Gene : Medtr5g058140 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR22811//PTHR22811:SF68 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN Description:  emp24/gp25L/p24 family protein
Genomic Order:  3119 Name:  ? Medtr5g058140
Secondary Identifier:  ? PAC:31091173
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g058140 0.5kb upstream 0.5kb upstream 5074 true chr5: 24021815-24026888 Medicago truncatula
Medtr5g058140 0.5kb upstream 0.5kb upstream 500 false chr5: 24026389-24026888 Medicago truncatula
Medtr5g058140 0.5kb downstream 0.5kb downstream 5074 true chr5: 24021315-24026388 Medicago truncatula
Medtr5g058140 0.5kb downstream 0.5kb downstream 500 false chr5: 24021315-24021814 Medicago truncatula
Medtr5g058140 1.0kb upstream 1.0kb upstream 5574 true chr5: 24021815-24027388 Medicago truncatula
Medtr5g058140 1.0kb upstream 1.0kb upstream 1000 false chr5: 24026389-24027388 Medicago truncatula
Medtr5g058140 1.0kb downstream 1.0kb downstream 5574 true chr5: 24020815-24026388 Medicago truncatula
Medtr5g058140 1.0kb downstream 1.0kb downstream 1000 false chr5: 24020815-24021814 Medicago truncatula
Medtr5g058140 2.0kb upstream 2.0kb upstream 6574 true chr5: 24021815-24028388 Medicago truncatula
Medtr5g058140 2.0kb upstream 2.0kb upstream 2000 false chr5: 24026389-24028388 Medicago truncatula
Medtr5g058140 2.0kb downstream 2.0kb downstream 6574 true chr5: 24019815-24026388 Medicago truncatula
Medtr5g058140 2.0kb downstream 2.0kb downstream 2000 false chr5: 24019815-24021814 Medicago truncatula
Medtr5g058140 5.0kb upstream 5.0kb upstream 9574 true chr5: 24021815-24031388 Medicago truncatula
Medtr5g058140 5.0kb upstream 5.0kb upstream 5000 false chr5: 24026389-24031388 Medicago truncatula
Medtr5g058140 5.0kb downstream 5.0kb downstream 9574 true chr5: 24016815-24026388 Medicago truncatula
Medtr5g058140 5.0kb downstream 5.0kb downstream 5000 false chr5: 24016815-24021814 Medicago truncatula
Medtr5g058140 10.0kb upstream 10.0kb upstream 14574 true chr5: 24021815-24036388 Medicago truncatula
Medtr5g058140 10.0kb upstream 10.0kb upstream 10000 false chr5: 24026389-24036388 Medicago truncatula
Medtr5g058140 10.0kb downstream 10.0kb downstream 14574 true chr5: 24011815-24026388 Medicago truncatula
Medtr5g058140 10.0kb downstream 10.0kb downstream 10000 false chr5: 24011815-24021814 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297897 5265 Fabidae View MSA
124065325 5270 Rosid View MSA
123743210 5271 Pentapetalae View MSA
122786619 5272 Eudicot View MSA
122045643 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.45        
cufflinks 3.229        
cufflinks 2.2       Low
cufflinks 4.436        
cufflinks 4.559        
cufflinks 4.458        
cufflinks 6.921       High
cufflinks 2.353       Low
cufflinks 5.147        

0 Strain