Gene : Medtr5g057460 M. truncatula Mt4.0v1
Defline:  (1 of 603) PF07127 - Late nodulin protein (Nodulin_late) Description:  Nodule Cysteine-Rich (NCR) secreted peptide
Genomic Order:  3086 Name:  ? Medtr5g057460
Secondary Identifier:  ? PAC:31085862
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g057460 0.5kb upstream 0.5kb upstream 1182 true chr5: 23591608-23592789 Medicago truncatula
Medtr5g057460 0.5kb upstream 0.5kb upstream 500 false chr5: 23592290-23592789 Medicago truncatula
Medtr5g057460 0.5kb downstream 0.5kb downstream 1182 true chr5: 23591108-23592289 Medicago truncatula
Medtr5g057460 0.5kb downstream 0.5kb downstream 500 false chr5: 23591108-23591607 Medicago truncatula
Medtr5g057460 1.0kb upstream 1.0kb upstream 1682 true chr5: 23591608-23593289 Medicago truncatula
Medtr5g057460 1.0kb upstream 1.0kb upstream 1000 false chr5: 23592290-23593289 Medicago truncatula
Medtr5g057460 1.0kb downstream 1.0kb downstream 1682 true chr5: 23590608-23592289 Medicago truncatula
Medtr5g057460 1.0kb downstream 1.0kb downstream 1000 false chr5: 23590608-23591607 Medicago truncatula
Medtr5g057460 2.0kb upstream 2.0kb upstream 2682 true chr5: 23591608-23594289 Medicago truncatula
Medtr5g057460 2.0kb upstream 2.0kb upstream 2000 false chr5: 23592290-23594289 Medicago truncatula
Medtr5g057460 2.0kb downstream 2.0kb downstream 2682 true chr5: 23589608-23592289 Medicago truncatula
Medtr5g057460 2.0kb downstream 2.0kb downstream 2000 false chr5: 23589608-23591607 Medicago truncatula
Medtr5g057460 5.0kb upstream 5.0kb upstream 5682 true chr5: 23591608-23597289 Medicago truncatula
Medtr5g057460 5.0kb upstream 5.0kb upstream 5000 false chr5: 23592290-23597289 Medicago truncatula
Medtr5g057460 5.0kb downstream 5.0kb downstream 5682 true chr5: 23586608-23592289 Medicago truncatula
Medtr5g057460 5.0kb downstream 5.0kb downstream 5000 false chr5: 23586608-23591607 Medicago truncatula
Medtr5g057460 10.0kb upstream 10.0kb upstream 10682 true chr5: 23591608-23602289 Medicago truncatula
Medtr5g057460 10.0kb upstream 10.0kb upstream 10000 false chr5: 23592290-23602289 Medicago truncatula
Medtr5g057460 10.0kb downstream 10.0kb downstream 10682 true chr5: 23581608-23592289 Medicago truncatula
Medtr5g057460 10.0kb downstream 10.0kb downstream 10000 false chr5: 23581608-23591607 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121625466 5273 Angiosperm Singleton cluster - no MSA
122263451 5265 Fabidae Singleton cluster - no MSA
124004606 5270 Rosid Singleton cluster - no MSA
123578711 5271 Pentapetalae Singleton cluster - no MSA
122613419 5272 Eudicot Singleton cluster - no MSA
120897570 5274 Embryophyte Singleton cluster - no MSA
122938225 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 50.673     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.044     Low  

0 Strain