Gene : Medtr5g054770 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF02617 - ATP-dependent Clp protease adaptor protein ClpS (ClpS) Description:  ATP-dependent Clp protease adaptor protein ClpS
Genomic Order:  2970 Name:  ? Medtr5g054770
Secondary Identifier:  ? PAC:31089961
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g054770 0.5kb upstream 0.5kb upstream 4511 true chr5: 22565523-22570033 Medicago truncatula
Medtr5g054770 0.5kb upstream 0.5kb upstream 500 false chr5: 22565523-22566022 Medicago truncatula
Medtr5g054770 0.5kb downstream 0.5kb downstream 4511 true chr5: 22566023-22570533 Medicago truncatula
Medtr5g054770 0.5kb downstream 0.5kb downstream 500 false chr5: 22570034-22570533 Medicago truncatula
Medtr5g054770 1.0kb upstream 1.0kb upstream 5011 true chr5: 22565023-22570033 Medicago truncatula
Medtr5g054770 1.0kb upstream 1.0kb upstream 1000 false chr5: 22565023-22566022 Medicago truncatula
Medtr5g054770 1.0kb downstream 1.0kb downstream 5011 true chr5: 22566023-22571033 Medicago truncatula
Medtr5g054770 1.0kb downstream 1.0kb downstream 1000 false chr5: 22570034-22571033 Medicago truncatula
Medtr5g054770 2.0kb upstream 2.0kb upstream 6011 true chr5: 22564023-22570033 Medicago truncatula
Medtr5g054770 2.0kb upstream 2.0kb upstream 2000 false chr5: 22564023-22566022 Medicago truncatula
Medtr5g054770 2.0kb downstream 2.0kb downstream 6011 true chr5: 22566023-22572033 Medicago truncatula
Medtr5g054770 2.0kb downstream 2.0kb downstream 2000 false chr5: 22570034-22572033 Medicago truncatula
Medtr5g054770 5.0kb upstream 5.0kb upstream 9011 true chr5: 22561023-22570033 Medicago truncatula
Medtr5g054770 5.0kb upstream 5.0kb upstream 5000 false chr5: 22561023-22566022 Medicago truncatula
Medtr5g054770 5.0kb downstream 5.0kb downstream 9011 true chr5: 22566023-22575033 Medicago truncatula
Medtr5g054770 5.0kb downstream 5.0kb downstream 5000 false chr5: 22570034-22575033 Medicago truncatula
Medtr5g054770 10.0kb upstream 10.0kb upstream 14011 true chr5: 22556023-22570033 Medicago truncatula
Medtr5g054770 10.0kb upstream 10.0kb upstream 10000 false chr5: 22556023-22566022 Medicago truncatula
Medtr5g054770 10.0kb downstream 10.0kb downstream 14011 true chr5: 22566023-22580033 Medicago truncatula
Medtr5g054770 10.0kb downstream 10.0kb downstream 10000 false chr5: 22570034-22580033 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305449 5265 Fabidae View MSA
124067434 5270 Rosid View MSA
123745289 5271 Pentapetalae View MSA
122787169 5272 Eudicot View MSA
122042739 5273 Angiosperm View MSA
121350486 5274 Embryophyte View MSA
123426220 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.106        
cufflinks 3.185        
cufflinks 5.143       High
cufflinks 1.705       Low
cufflinks 3.641        
cufflinks 2.397        
cufflinks 2.242        
cufflinks 3.053        
cufflinks 2.454        

0 Strain