Gene : Medtr5g062310 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10174//PTHR10174:SF148 - RETINALDEHYDE BINDING PROTEIN-RELATED Description:  Sec14p-like phosphatidylinositol transfer family protein
Genomic Order:  3323 Name:  ? Medtr5g062310
Secondary Identifier:  ? PAC:31086711
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g062310 0.5kb upstream 0.5kb upstream 5183 true chr5: 25872374-25877556 Medicago truncatula
Medtr5g062310 0.5kb upstream 0.5kb upstream 500 false chr5: 25877057-25877556 Medicago truncatula
Medtr5g062310 0.5kb downstream 0.5kb downstream 5183 true chr5: 25871874-25877056 Medicago truncatula
Medtr5g062310 0.5kb downstream 0.5kb downstream 500 false chr5: 25871874-25872373 Medicago truncatula
Medtr5g062310 1.0kb upstream 1.0kb upstream 5683 true chr5: 25872374-25878056 Medicago truncatula
Medtr5g062310 1.0kb upstream 1.0kb upstream 1000 false chr5: 25877057-25878056 Medicago truncatula
Medtr5g062310 1.0kb downstream 1.0kb downstream 5683 true chr5: 25871374-25877056 Medicago truncatula
Medtr5g062310 1.0kb downstream 1.0kb downstream 1000 false chr5: 25871374-25872373 Medicago truncatula
Medtr5g062310 2.0kb upstream 2.0kb upstream 6683 true chr5: 25872374-25879056 Medicago truncatula
Medtr5g062310 2.0kb upstream 2.0kb upstream 2000 false chr5: 25877057-25879056 Medicago truncatula
Medtr5g062310 2.0kb downstream 2.0kb downstream 6683 true chr5: 25870374-25877056 Medicago truncatula
Medtr5g062310 2.0kb downstream 2.0kb downstream 2000 false chr5: 25870374-25872373 Medicago truncatula
Medtr5g062310 5.0kb upstream 5.0kb upstream 9683 true chr5: 25872374-25882056 Medicago truncatula
Medtr5g062310 5.0kb upstream 5.0kb upstream 5000 false chr5: 25877057-25882056 Medicago truncatula
Medtr5g062310 5.0kb downstream 5.0kb downstream 9683 true chr5: 25867374-25877056 Medicago truncatula
Medtr5g062310 5.0kb downstream 5.0kb downstream 5000 false chr5: 25867374-25872373 Medicago truncatula
Medtr5g062310 10.0kb upstream 10.0kb upstream 14683 true chr5: 25872374-25887056 Medicago truncatula
Medtr5g062310 10.0kb upstream 10.0kb upstream 10000 false chr5: 25877057-25887056 Medicago truncatula
Medtr5g062310 10.0kb downstream 10.0kb downstream 14683 true chr5: 25862374-25877056 Medicago truncatula
Medtr5g062310 10.0kb downstream 10.0kb downstream 10000 false chr5: 25862374-25872373 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306259 5265 Fabidae View MSA
124071826 5270 Rosid View MSA
123742698 5271 Pentapetalae View MSA
122787147 5272 Eudicot View MSA
122046341 5273 Angiosperm View MSA
121350309 5274 Embryophyte View MSA
123427540 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.151        
cufflinks 0.281       Low
cufflinks 0.512        
cufflinks 1.139        
cufflinks 0.479        
cufflinks 0.931        
cufflinks 2.564       High
cufflinks 0.366       Low
cufflinks 1.169        

0 Strain