Gene : Medtr5g054570 M. truncatula Mt4.0v1
Defline:  (1 of 65) PF12776 - Myb/SANT-like DNA-binding domain (Myb_DNA-bind_3) Description:  Myb/SANT-like DNA-binding domain protein
Genomic Order:  2962 Name:  ? Medtr5g054570
Secondary Identifier:  ? PAC:31089975
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g054570 0.5kb upstream 0.5kb upstream 1559 true chr5: 22477670-22479228 Medicago truncatula
Medtr5g054570 0.5kb upstream 0.5kb upstream 500 false chr5: 22477670-22478169 Medicago truncatula
Medtr5g054570 0.5kb downstream 0.5kb downstream 1559 true chr5: 22478170-22479728 Medicago truncatula
Medtr5g054570 0.5kb downstream 0.5kb downstream 500 false chr5: 22479229-22479728 Medicago truncatula
Medtr5g054570 1.0kb upstream 1.0kb upstream 2059 true chr5: 22477170-22479228 Medicago truncatula
Medtr5g054570 1.0kb upstream 1.0kb upstream 1000 false chr5: 22477170-22478169 Medicago truncatula
Medtr5g054570 1.0kb downstream 1.0kb downstream 2059 true chr5: 22478170-22480228 Medicago truncatula
Medtr5g054570 1.0kb downstream 1.0kb downstream 1000 false chr5: 22479229-22480228 Medicago truncatula
Medtr5g054570 2.0kb upstream 2.0kb upstream 3059 true chr5: 22476170-22479228 Medicago truncatula
Medtr5g054570 2.0kb upstream 2.0kb upstream 2000 false chr5: 22476170-22478169 Medicago truncatula
Medtr5g054570 2.0kb downstream 2.0kb downstream 3059 true chr5: 22478170-22481228 Medicago truncatula
Medtr5g054570 2.0kb downstream 2.0kb downstream 2000 false chr5: 22479229-22481228 Medicago truncatula
Medtr5g054570 5.0kb upstream 5.0kb upstream 6059 true chr5: 22473170-22479228 Medicago truncatula
Medtr5g054570 5.0kb upstream 5.0kb upstream 5000 false chr5: 22473170-22478169 Medicago truncatula
Medtr5g054570 5.0kb downstream 5.0kb downstream 6059 true chr5: 22478170-22484228 Medicago truncatula
Medtr5g054570 5.0kb downstream 5.0kb downstream 5000 false chr5: 22479229-22484228 Medicago truncatula
Medtr5g054570 10.0kb upstream 10.0kb upstream 11059 true chr5: 22468170-22479228 Medicago truncatula
Medtr5g054570 10.0kb upstream 10.0kb upstream 10000 false chr5: 22468170-22478169 Medicago truncatula
Medtr5g054570 10.0kb downstream 10.0kb downstream 11059 true chr5: 22478170-22489228 Medicago truncatula
Medtr5g054570 10.0kb downstream 10.0kb downstream 10000 false chr5: 22479229-22489228 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315089 5265 Fabidae View MSA
124072916 5270 Rosid View MSA
123753432 5271 Pentapetalae View MSA
122797499 5272 Eudicot View MSA
122051638 5273 Angiosperm View MSA
121312593 5274 Embryophyte View MSA
123349751 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.255       High
cufflinks 0.093        
cufflinks 0.078        
cufflinks 0.044     Low  
cufflinks 0.08        
cufflinks 0.115     Low  
cufflinks 0.057     Low  
cufflinks 0.033     Low Low
cufflinks 0.069     Low  

0 Strain