Gene : Medtr5g053940 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10804:SF68 - METHIONINE AMINOPEPTIDASE 1B, CHLOROPLASTIC Description:  methionine aminopeptidase 1B
Genomic Order:  2944 Name:  ? Medtr5g053940
Secondary Identifier:  ? PAC:31089243
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g053940 0.5kb upstream 0.5kb upstream 11410 true chr5: 22213253-22224662 Medicago truncatula
Medtr5g053940 0.5kb upstream 0.5kb upstream 500 false chr5: 22213253-22213752 Medicago truncatula
Medtr5g053940 0.5kb downstream 0.5kb downstream 11410 true chr5: 22213753-22225162 Medicago truncatula
Medtr5g053940 0.5kb downstream 0.5kb downstream 500 false chr5: 22224663-22225162 Medicago truncatula
Medtr5g053940 1.0kb upstream 1.0kb upstream 11910 true chr5: 22212753-22224662 Medicago truncatula
Medtr5g053940 1.0kb upstream 1.0kb upstream 1000 false chr5: 22212753-22213752 Medicago truncatula
Medtr5g053940 1.0kb downstream 1.0kb downstream 11910 true chr5: 22213753-22225662 Medicago truncatula
Medtr5g053940 1.0kb downstream 1.0kb downstream 1000 false chr5: 22224663-22225662 Medicago truncatula
Medtr5g053940 2.0kb upstream 2.0kb upstream 12910 true chr5: 22211753-22224662 Medicago truncatula
Medtr5g053940 2.0kb upstream 2.0kb upstream 2000 false chr5: 22211753-22213752 Medicago truncatula
Medtr5g053940 2.0kb downstream 2.0kb downstream 12910 true chr5: 22213753-22226662 Medicago truncatula
Medtr5g053940 2.0kb downstream 2.0kb downstream 2000 false chr5: 22224663-22226662 Medicago truncatula
Medtr5g053940 5.0kb upstream 5.0kb upstream 15910 true chr5: 22208753-22224662 Medicago truncatula
Medtr5g053940 5.0kb upstream 5.0kb upstream 5000 false chr5: 22208753-22213752 Medicago truncatula
Medtr5g053940 5.0kb downstream 5.0kb downstream 15910 true chr5: 22213753-22229662 Medicago truncatula
Medtr5g053940 5.0kb downstream 5.0kb downstream 5000 false chr5: 22224663-22229662 Medicago truncatula
Medtr5g053940 10.0kb upstream 10.0kb upstream 20910 true chr5: 22203753-22224662 Medicago truncatula
Medtr5g053940 10.0kb upstream 10.0kb upstream 10000 false chr5: 22203753-22213752 Medicago truncatula
Medtr5g053940 10.0kb downstream 10.0kb downstream 20910 true chr5: 22213753-22234662 Medicago truncatula
Medtr5g053940 10.0kb downstream 10.0kb downstream 10000 false chr5: 22224663-22234662 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301778 5265 Fabidae View MSA
124066750 5270 Rosid View MSA
123749440 5271 Pentapetalae View MSA
122791523 5272 Eudicot View MSA
122046775 5273 Angiosperm View MSA
123429177 5275 Viridiplantae View MSA
121348768 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.084        
cufflinks 1.078       High
cufflinks 0.636        
cufflinks 0.032     Low  
cufflinks 1.641       High
cufflinks 0.01     Low Low
cufflinks 0.051     Low  
cufflinks 0.935        
cufflinks 0.064     Low  

0 Strain