Gene : Medtr5g063600 M. truncatula Mt4.0v1
Defline:  (1 of 603) PF07127 - Late nodulin protein (Nodulin_late) Description:  Nodule Cysteine-Rich (NCR) secreted peptide
Genomic Order:  3377 Name:  ? Medtr5g063600
Secondary Identifier:  ? PAC:31092002
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g063600 0.5kb upstream 0.5kb upstream 1538 true chr5: 26349183-26350720 Medicago truncatula
Medtr5g063600 0.5kb upstream 0.5kb upstream 500 false chr5: 26349183-26349682 Medicago truncatula
Medtr5g063600 0.5kb downstream 0.5kb downstream 1538 true chr5: 26349683-26351220 Medicago truncatula
Medtr5g063600 0.5kb downstream 0.5kb downstream 500 false chr5: 26350721-26351220 Medicago truncatula
Medtr5g063600 1.0kb upstream 1.0kb upstream 2038 true chr5: 26348683-26350720 Medicago truncatula
Medtr5g063600 1.0kb upstream 1.0kb upstream 1000 false chr5: 26348683-26349682 Medicago truncatula
Medtr5g063600 1.0kb downstream 1.0kb downstream 2038 true chr5: 26349683-26351720 Medicago truncatula
Medtr5g063600 1.0kb downstream 1.0kb downstream 1000 false chr5: 26350721-26351720 Medicago truncatula
Medtr5g063600 2.0kb upstream 2.0kb upstream 3038 true chr5: 26347683-26350720 Medicago truncatula
Medtr5g063600 2.0kb upstream 2.0kb upstream 2000 false chr5: 26347683-26349682 Medicago truncatula
Medtr5g063600 2.0kb downstream 2.0kb downstream 3038 true chr5: 26349683-26352720 Medicago truncatula
Medtr5g063600 2.0kb downstream 2.0kb downstream 2000 false chr5: 26350721-26352720 Medicago truncatula
Medtr5g063600 5.0kb upstream 5.0kb upstream 6038 true chr5: 26344683-26350720 Medicago truncatula
Medtr5g063600 5.0kb upstream 5.0kb upstream 5000 false chr5: 26344683-26349682 Medicago truncatula
Medtr5g063600 5.0kb downstream 5.0kb downstream 6038 true chr5: 26349683-26355720 Medicago truncatula
Medtr5g063600 5.0kb downstream 5.0kb downstream 5000 false chr5: 26350721-26355720 Medicago truncatula
Medtr5g063600 10.0kb upstream 10.0kb upstream 11038 true chr5: 26339683-26350720 Medicago truncatula
Medtr5g063600 10.0kb upstream 10.0kb upstream 10000 false chr5: 26339683-26349682 Medicago truncatula
Medtr5g063600 10.0kb downstream 10.0kb downstream 11038 true chr5: 26349683-26360720 Medicago truncatula
Medtr5g063600 10.0kb downstream 10.0kb downstream 10000 false chr5: 26350721-26360720 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121633246 5273 Angiosperm View MSA
122272116 5265 Fabidae View MSA
124012658 5270 Rosid View MSA
123586506 5271 Pentapetalae View MSA
122621199 5272 Eudicot View MSA
120905350 5274 Embryophyte View MSA
122945999 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 172.918     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain