Gene : Medtr5g063200 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22904//PTHR22904:SF360 - TPR REPEAT CONTAINING PROTEIN Description:  inactive TPR repeat thioredoxin TTL3-like protein
Genomic Order:  3358 Name:  ? Medtr5g063200
Secondary Identifier:  ? PAC:31087840
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g063200 0.5kb upstream 0.5kb upstream 4811 true chr5: 26206440-26211250 Medicago truncatula
Medtr5g063200 0.5kb upstream 0.5kb upstream 500 false chr5: 26210751-26211250 Medicago truncatula
Medtr5g063200 0.5kb downstream 0.5kb downstream 4811 true chr5: 26205940-26210750 Medicago truncatula
Medtr5g063200 0.5kb downstream 0.5kb downstream 500 false chr5: 26205940-26206439 Medicago truncatula
Medtr5g063200 1.0kb upstream 1.0kb upstream 5311 true chr5: 26206440-26211750 Medicago truncatula
Medtr5g063200 1.0kb upstream 1.0kb upstream 1000 false chr5: 26210751-26211750 Medicago truncatula
Medtr5g063200 1.0kb downstream 1.0kb downstream 5311 true chr5: 26205440-26210750 Medicago truncatula
Medtr5g063200 1.0kb downstream 1.0kb downstream 1000 false chr5: 26205440-26206439 Medicago truncatula
Medtr5g063200 2.0kb upstream 2.0kb upstream 6311 true chr5: 26206440-26212750 Medicago truncatula
Medtr5g063200 2.0kb upstream 2.0kb upstream 2000 false chr5: 26210751-26212750 Medicago truncatula
Medtr5g063200 2.0kb downstream 2.0kb downstream 6311 true chr5: 26204440-26210750 Medicago truncatula
Medtr5g063200 2.0kb downstream 2.0kb downstream 2000 false chr5: 26204440-26206439 Medicago truncatula
Medtr5g063200 5.0kb upstream 5.0kb upstream 9311 true chr5: 26206440-26215750 Medicago truncatula
Medtr5g063200 5.0kb upstream 5.0kb upstream 5000 false chr5: 26210751-26215750 Medicago truncatula
Medtr5g063200 5.0kb downstream 5.0kb downstream 9311 true chr5: 26201440-26210750 Medicago truncatula
Medtr5g063200 5.0kb downstream 5.0kb downstream 5000 false chr5: 26201440-26206439 Medicago truncatula
Medtr5g063200 10.0kb upstream 10.0kb upstream 14311 true chr5: 26206440-26220750 Medicago truncatula
Medtr5g063200 10.0kb upstream 10.0kb upstream 10000 false chr5: 26210751-26220750 Medicago truncatula
Medtr5g063200 10.0kb downstream 10.0kb downstream 14311 true chr5: 26196440-26210750 Medicago truncatula
Medtr5g063200 10.0kb downstream 10.0kb downstream 10000 false chr5: 26196440-26206439 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311538 5265 Fabidae View MSA
124069860 5270 Rosid View MSA
123742749 5271 Pentapetalae View MSA
122798057 5272 Eudicot View MSA
122047040 5273 Angiosperm View MSA
121310683 5274 Embryophyte View MSA
123348108 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.226       Low
cufflinks 1.095        
cufflinks 0.301        
cufflinks 0.877        
cufflinks 0.494        
cufflinks 0.593        
cufflinks 1.501        
cufflinks 0.31        
cufflinks 3.595       High

0 Strain