Gene : Medtr5g063490 M. truncatula Mt4.0v1
Defline:  (1 of 603) PF07127 - Late nodulin protein (Nodulin_late) Description:  Nodule Cysteine-Rich (NCR) secreted peptide
Genomic Order:  3373 Name:  ? Medtr5g063490
Secondary Identifier:  ? PAC:31087694
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g063490 0.5kb upstream 0.5kb upstream 1232 true chr5: 26315008-26316239 Medicago truncatula
Medtr5g063490 0.5kb upstream 0.5kb upstream 500 false chr5: 26315008-26315507 Medicago truncatula
Medtr5g063490 0.5kb downstream 0.5kb downstream 1232 true chr5: 26315508-26316739 Medicago truncatula
Medtr5g063490 0.5kb downstream 0.5kb downstream 500 false chr5: 26316240-26316739 Medicago truncatula
Medtr5g063490 1.0kb upstream 1.0kb upstream 1732 true chr5: 26314508-26316239 Medicago truncatula
Medtr5g063490 1.0kb upstream 1.0kb upstream 1000 false chr5: 26314508-26315507 Medicago truncatula
Medtr5g063490 1.0kb downstream 1.0kb downstream 1732 true chr5: 26315508-26317239 Medicago truncatula
Medtr5g063490 1.0kb downstream 1.0kb downstream 1000 false chr5: 26316240-26317239 Medicago truncatula
Medtr5g063490 2.0kb upstream 2.0kb upstream 2732 true chr5: 26313508-26316239 Medicago truncatula
Medtr5g063490 2.0kb upstream 2.0kb upstream 2000 false chr5: 26313508-26315507 Medicago truncatula
Medtr5g063490 2.0kb downstream 2.0kb downstream 2732 true chr5: 26315508-26318239 Medicago truncatula
Medtr5g063490 2.0kb downstream 2.0kb downstream 2000 false chr5: 26316240-26318239 Medicago truncatula
Medtr5g063490 5.0kb upstream 5.0kb upstream 5732 true chr5: 26310508-26316239 Medicago truncatula
Medtr5g063490 5.0kb upstream 5.0kb upstream 5000 false chr5: 26310508-26315507 Medicago truncatula
Medtr5g063490 5.0kb downstream 5.0kb downstream 5732 true chr5: 26315508-26321239 Medicago truncatula
Medtr5g063490 5.0kb downstream 5.0kb downstream 5000 false chr5: 26316240-26321239 Medicago truncatula
Medtr5g063490 10.0kb upstream 10.0kb upstream 10732 true chr5: 26305508-26316239 Medicago truncatula
Medtr5g063490 10.0kb upstream 10.0kb upstream 10000 false chr5: 26305508-26315507 Medicago truncatula
Medtr5g063490 10.0kb downstream 10.0kb downstream 10732 true chr5: 26315508-26326239 Medicago truncatula
Medtr5g063490 10.0kb downstream 10.0kb downstream 10000 false chr5: 26316240-26326239 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121633246 5273 Angiosperm View MSA
122272116 5265 Fabidae View MSA
124012658 5270 Rosid View MSA
123586506 5271 Pentapetalae View MSA
122621199 5272 Eudicot View MSA
120905350 5274 Embryophyte View MSA
122945999 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.881     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain