Gene : Medtr5g063080 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10788:SF25 - TREHALOSE-PHOSPHATE PHOSPHATASE D-RELATED Description:  trehalose-6-phosphate phosphatase
Genomic Order:  3355 Name:  ? Medtr5g063080
Secondary Identifier:  ? PAC:31087052
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g063080 0.5kb upstream 0.5kb upstream 3280 true chr5: 26142024-26145303 Medicago truncatula
Medtr5g063080 0.5kb upstream 0.5kb upstream 500 false chr5: 26144804-26145303 Medicago truncatula
Medtr5g063080 0.5kb downstream 0.5kb downstream 3280 true chr5: 26141524-26144803 Medicago truncatula
Medtr5g063080 0.5kb downstream 0.5kb downstream 500 false chr5: 26141524-26142023 Medicago truncatula
Medtr5g063080 1.0kb upstream 1.0kb upstream 3780 true chr5: 26142024-26145803 Medicago truncatula
Medtr5g063080 1.0kb upstream 1.0kb upstream 1000 false chr5: 26144804-26145803 Medicago truncatula
Medtr5g063080 1.0kb downstream 1.0kb downstream 3780 true chr5: 26141024-26144803 Medicago truncatula
Medtr5g063080 1.0kb downstream 1.0kb downstream 1000 false chr5: 26141024-26142023 Medicago truncatula
Medtr5g063080 2.0kb upstream 2.0kb upstream 4780 true chr5: 26142024-26146803 Medicago truncatula
Medtr5g063080 2.0kb upstream 2.0kb upstream 2000 false chr5: 26144804-26146803 Medicago truncatula
Medtr5g063080 2.0kb downstream 2.0kb downstream 4780 true chr5: 26140024-26144803 Medicago truncatula
Medtr5g063080 2.0kb downstream 2.0kb downstream 2000 false chr5: 26140024-26142023 Medicago truncatula
Medtr5g063080 5.0kb upstream 5.0kb upstream 7780 true chr5: 26142024-26149803 Medicago truncatula
Medtr5g063080 5.0kb upstream 5.0kb upstream 5000 false chr5: 26144804-26149803 Medicago truncatula
Medtr5g063080 5.0kb downstream 5.0kb downstream 7780 true chr5: 26137024-26144803 Medicago truncatula
Medtr5g063080 5.0kb downstream 5.0kb downstream 5000 false chr5: 26137024-26142023 Medicago truncatula
Medtr5g063080 10.0kb upstream 10.0kb upstream 12780 true chr5: 26142024-26154803 Medicago truncatula
Medtr5g063080 10.0kb upstream 10.0kb upstream 10000 false chr5: 26144804-26154803 Medicago truncatula
Medtr5g063080 10.0kb downstream 10.0kb downstream 12780 true chr5: 26132024-26144803 Medicago truncatula
Medtr5g063080 10.0kb downstream 10.0kb downstream 10000 false chr5: 26132024-26142023 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297464 5265 Fabidae View MSA
124069564 5270 Rosid View MSA
123746966 5271 Pentapetalae View MSA
122786046 5272 Eudicot View MSA
122042129 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 57.71     High  
cufflinks 0.427        
cufflinks 0.35        
cufflinks 31.589     High  
cufflinks 0.229       Low
cufflinks 16.407     High  
cufflinks 200.566     High High
cufflinks 0.178       Low
cufflinks 180.527     High High

0 Strain