Gene : Medtr5g062370 M. truncatula Mt4.0v1
Defline:  (1 of 9) 3.2.1.37//3.2.1.55 - Xylan 1,4-beta-xylosidase / Xylobiase // Non-reducing end alpha-L-arabinofuranosidase / Arabinosidase Description:  glycoside hydrolase family 3 amine-terminal domain protein
Genomic Order:  3327 Name:  ? Medtr5g062370
Secondary Identifier:  ? PAC:31088495
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g062370 0.5kb upstream 0.5kb upstream 9090 true chr5: 25904566-25913655 Medicago truncatula
Medtr5g062370 0.5kb upstream 0.5kb upstream 500 false chr5: 25913156-25913655 Medicago truncatula
Medtr5g062370 0.5kb downstream 0.5kb downstream 9090 true chr5: 25904066-25913155 Medicago truncatula
Medtr5g062370 0.5kb downstream 0.5kb downstream 500 false chr5: 25904066-25904565 Medicago truncatula
Medtr5g062370 1.0kb upstream 1.0kb upstream 9590 true chr5: 25904566-25914155 Medicago truncatula
Medtr5g062370 1.0kb upstream 1.0kb upstream 1000 false chr5: 25913156-25914155 Medicago truncatula
Medtr5g062370 1.0kb downstream 1.0kb downstream 9590 true chr5: 25903566-25913155 Medicago truncatula
Medtr5g062370 1.0kb downstream 1.0kb downstream 1000 false chr5: 25903566-25904565 Medicago truncatula
Medtr5g062370 2.0kb upstream 2.0kb upstream 10590 true chr5: 25904566-25915155 Medicago truncatula
Medtr5g062370 2.0kb upstream 2.0kb upstream 2000 false chr5: 25913156-25915155 Medicago truncatula
Medtr5g062370 2.0kb downstream 2.0kb downstream 10590 true chr5: 25902566-25913155 Medicago truncatula
Medtr5g062370 2.0kb downstream 2.0kb downstream 2000 false chr5: 25902566-25904565 Medicago truncatula
Medtr5g062370 5.0kb upstream 5.0kb upstream 13590 true chr5: 25904566-25918155 Medicago truncatula
Medtr5g062370 5.0kb upstream 5.0kb upstream 5000 false chr5: 25913156-25918155 Medicago truncatula
Medtr5g062370 5.0kb downstream 5.0kb downstream 13590 true chr5: 25899566-25913155 Medicago truncatula
Medtr5g062370 5.0kb downstream 5.0kb downstream 5000 false chr5: 25899566-25904565 Medicago truncatula
Medtr5g062370 10.0kb upstream 10.0kb upstream 18590 true chr5: 25904566-25923155 Medicago truncatula
Medtr5g062370 10.0kb upstream 10.0kb upstream 10000 false chr5: 25913156-25923155 Medicago truncatula
Medtr5g062370 10.0kb downstream 10.0kb downstream 18590 true chr5: 25894566-25913155 Medicago truncatula
Medtr5g062370 10.0kb downstream 10.0kb downstream 10000 false chr5: 25894566-25904565 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309781 5265 Fabidae View MSA
124074265 5270 Rosid View MSA
123741935 5271 Pentapetalae View MSA
122794442 5272 Eudicot View MSA
122048510 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.257        
cufflinks 0.386        
cufflinks 0.883       High
cufflinks 0.014     Low  
cufflinks 0.136        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low Low
cufflinks 0.627        
cufflinks 0.007     Low Low

0 Strain