Gene : Medtr5g061740 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11945:SF154 - F2E2.20-RELATED Description:  MADS-box transcription factor
Genomic Order:  3294 Name:  ? Medtr5g061740
Secondary Identifier:  ? PAC:31087470
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g061740 0.5kb upstream 0.5kb upstream 6035 true chr5: 25654991-25661025 Medicago truncatula
Medtr5g061740 0.5kb upstream 0.5kb upstream 500 false chr5: 25660526-25661025 Medicago truncatula
Medtr5g061740 0.5kb downstream 0.5kb downstream 6035 true chr5: 25654491-25660525 Medicago truncatula
Medtr5g061740 0.5kb downstream 0.5kb downstream 500 false chr5: 25654491-25654990 Medicago truncatula
Medtr5g061740 1.0kb upstream 1.0kb upstream 6535 true chr5: 25654991-25661525 Medicago truncatula
Medtr5g061740 1.0kb upstream 1.0kb upstream 1000 false chr5: 25660526-25661525 Medicago truncatula
Medtr5g061740 1.0kb downstream 1.0kb downstream 6535 true chr5: 25653991-25660525 Medicago truncatula
Medtr5g061740 1.0kb downstream 1.0kb downstream 1000 false chr5: 25653991-25654990 Medicago truncatula
Medtr5g061740 2.0kb upstream 2.0kb upstream 7535 true chr5: 25654991-25662525 Medicago truncatula
Medtr5g061740 2.0kb upstream 2.0kb upstream 2000 false chr5: 25660526-25662525 Medicago truncatula
Medtr5g061740 2.0kb downstream 2.0kb downstream 7535 true chr5: 25652991-25660525 Medicago truncatula
Medtr5g061740 2.0kb downstream 2.0kb downstream 2000 false chr5: 25652991-25654990 Medicago truncatula
Medtr5g061740 5.0kb upstream 5.0kb upstream 10535 true chr5: 25654991-25665525 Medicago truncatula
Medtr5g061740 5.0kb upstream 5.0kb upstream 5000 false chr5: 25660526-25665525 Medicago truncatula
Medtr5g061740 5.0kb downstream 5.0kb downstream 10535 true chr5: 25649991-25660525 Medicago truncatula
Medtr5g061740 5.0kb downstream 5.0kb downstream 5000 false chr5: 25649991-25654990 Medicago truncatula
Medtr5g061740 10.0kb upstream 10.0kb upstream 15535 true chr5: 25654991-25670525 Medicago truncatula
Medtr5g061740 10.0kb upstream 10.0kb upstream 10000 false chr5: 25660526-25670525 Medicago truncatula
Medtr5g061740 10.0kb downstream 10.0kb downstream 15535 true chr5: 25644991-25660525 Medicago truncatula
Medtr5g061740 10.0kb downstream 10.0kb downstream 10000 false chr5: 25644991-25654990 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298896 5265 Fabidae View MSA
124063707 5270 Rosid View MSA
123753647 5271 Pentapetalae View MSA
122786853 5272 Eudicot View MSA
122050633 5273 Angiosperm View MSA
121350455 5274 Embryophyte View MSA
123427239 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.014     Low High
cufflinks 0.002     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain