Gene : Medtr5g060320 M. truncatula Mt4.0v1
Defline:  (1 of 8) PTHR18966//PTHR18966:SF202 - IONOTROPIC GLUTAMATE RECEPTOR Description:  transmembrane protein, putative
Genomic Order:  3218 Name:  ? Medtr5g060320
Secondary Identifier:  ? PAC:31085194
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g060320 0.5kb upstream 0.5kb upstream 803 true chr5: 24985108-24985910 Medicago truncatula
Medtr5g060320 0.5kb upstream 0.5kb upstream 500 false chr5: 24985108-24985607 Medicago truncatula
Medtr5g060320 0.5kb downstream 0.5kb downstream 803 true chr5: 24985608-24986410 Medicago truncatula
Medtr5g060320 0.5kb downstream 0.5kb downstream 500 false chr5: 24985911-24986410 Medicago truncatula
Medtr5g060320 1.0kb upstream 1.0kb upstream 1303 true chr5: 24984608-24985910 Medicago truncatula
Medtr5g060320 1.0kb upstream 1.0kb upstream 1000 false chr5: 24984608-24985607 Medicago truncatula
Medtr5g060320 1.0kb downstream 1.0kb downstream 1303 true chr5: 24985608-24986910 Medicago truncatula
Medtr5g060320 1.0kb downstream 1.0kb downstream 1000 false chr5: 24985911-24986910 Medicago truncatula
Medtr5g060320 2.0kb upstream 2.0kb upstream 2303 true chr5: 24983608-24985910 Medicago truncatula
Medtr5g060320 2.0kb upstream 2.0kb upstream 2000 false chr5: 24983608-24985607 Medicago truncatula
Medtr5g060320 2.0kb downstream 2.0kb downstream 2303 true chr5: 24985608-24987910 Medicago truncatula
Medtr5g060320 2.0kb downstream 2.0kb downstream 2000 false chr5: 24985911-24987910 Medicago truncatula
Medtr5g060320 5.0kb upstream 5.0kb upstream 5303 true chr5: 24980608-24985910 Medicago truncatula
Medtr5g060320 5.0kb upstream 5.0kb upstream 5000 false chr5: 24980608-24985607 Medicago truncatula
Medtr5g060320 5.0kb downstream 5.0kb downstream 5303 true chr5: 24985608-24990910 Medicago truncatula
Medtr5g060320 5.0kb downstream 5.0kb downstream 5000 false chr5: 24985911-24990910 Medicago truncatula
Medtr5g060320 10.0kb upstream 10.0kb upstream 10303 true chr5: 24975608-24985910 Medicago truncatula
Medtr5g060320 10.0kb upstream 10.0kb upstream 10000 false chr5: 24975608-24985607 Medicago truncatula
Medtr5g060320 10.0kb downstream 10.0kb downstream 10303 true chr5: 24985608-24995910 Medicago truncatula
Medtr5g060320 10.0kb downstream 10.0kb downstream 10000 false chr5: 24985911-24995910 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657782 5273 Angiosperm View MSA
122296357 5265 Fabidae View MSA
124040123 5270 Rosid View MSA
123611690 5271 Pentapetalae View MSA
122646240 5272 Eudicot View MSA
120929812 5274 Embryophyte View MSA
122970365 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.062     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.747       High
cufflinks 0.032     Low  
cufflinks 0.12        

0 Strain