Gene : Medtr5g062290 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR10551//PTHR10551:SF12 - FASCIN Description:  glycoside hydrolase family 5 protein
Genomic Order:  3321 Name:  ? Medtr5g062290
Secondary Identifier:  ? PAC:31088388
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g062290 0.5kb upstream 0.5kb upstream 5302 true chr5: 25861885-25867186 Medicago truncatula
Medtr5g062290 0.5kb upstream 0.5kb upstream 500 false chr5: 25866687-25867186 Medicago truncatula
Medtr5g062290 0.5kb downstream 0.5kb downstream 5302 true chr5: 25861385-25866686 Medicago truncatula
Medtr5g062290 0.5kb downstream 0.5kb downstream 500 false chr5: 25861385-25861884 Medicago truncatula
Medtr5g062290 1.0kb upstream 1.0kb upstream 5802 true chr5: 25861885-25867686 Medicago truncatula
Medtr5g062290 1.0kb upstream 1.0kb upstream 1000 false chr5: 25866687-25867686 Medicago truncatula
Medtr5g062290 1.0kb downstream 1.0kb downstream 5802 true chr5: 25860885-25866686 Medicago truncatula
Medtr5g062290 1.0kb downstream 1.0kb downstream 1000 false chr5: 25860885-25861884 Medicago truncatula
Medtr5g062290 2.0kb upstream 2.0kb upstream 6802 true chr5: 25861885-25868686 Medicago truncatula
Medtr5g062290 2.0kb upstream 2.0kb upstream 2000 false chr5: 25866687-25868686 Medicago truncatula
Medtr5g062290 2.0kb downstream 2.0kb downstream 6802 true chr5: 25859885-25866686 Medicago truncatula
Medtr5g062290 2.0kb downstream 2.0kb downstream 2000 false chr5: 25859885-25861884 Medicago truncatula
Medtr5g062290 5.0kb upstream 5.0kb upstream 9802 true chr5: 25861885-25871686 Medicago truncatula
Medtr5g062290 5.0kb upstream 5.0kb upstream 5000 false chr5: 25866687-25871686 Medicago truncatula
Medtr5g062290 5.0kb downstream 5.0kb downstream 9802 true chr5: 25856885-25866686 Medicago truncatula
Medtr5g062290 5.0kb downstream 5.0kb downstream 5000 false chr5: 25856885-25861884 Medicago truncatula
Medtr5g062290 10.0kb upstream 10.0kb upstream 14802 true chr5: 25861885-25876686 Medicago truncatula
Medtr5g062290 10.0kb upstream 10.0kb upstream 10000 false chr5: 25866687-25876686 Medicago truncatula
Medtr5g062290 10.0kb downstream 10.0kb downstream 14802 true chr5: 25851885-25866686 Medicago truncatula
Medtr5g062290 10.0kb downstream 10.0kb downstream 10000 false chr5: 25851885-25861884 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311820 5265 Fabidae View MSA
124070135 5270 Rosid View MSA
123746465 5271 Pentapetalae View MSA
122796777 5272 Eudicot View MSA
122048839 5273 Angiosperm View MSA
121348630 5274 Embryophyte View MSA
123380948 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.022        
cufflinks 1.67       High
cufflinks 1.053        
cufflinks 0.511       Low
cufflinks 1.568       High
cufflinks 0.701        
cufflinks 1.258        
cufflinks 1.353        
cufflinks 0.765        

0 Strain