Gene : Medtr5g062190 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR10551//PTHR10551:SF12 - FASCIN Description:  glycoside hydrolase family 5 protein
Genomic Order:  3317 Name:  ? Medtr5g062190
Secondary Identifier:  ? PAC:31086305
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g062190 0.5kb upstream 0.5kb upstream 6062 true chr5: 25812708-25818769 Medicago truncatula
Medtr5g062190 0.5kb upstream 0.5kb upstream 500 false chr5: 25818270-25818769 Medicago truncatula
Medtr5g062190 0.5kb downstream 0.5kb downstream 6062 true chr5: 25812208-25818269 Medicago truncatula
Medtr5g062190 0.5kb downstream 0.5kb downstream 500 false chr5: 25812208-25812707 Medicago truncatula
Medtr5g062190 1.0kb upstream 1.0kb upstream 6562 true chr5: 25812708-25819269 Medicago truncatula
Medtr5g062190 1.0kb upstream 1.0kb upstream 1000 false chr5: 25818270-25819269 Medicago truncatula
Medtr5g062190 1.0kb downstream 1.0kb downstream 6562 true chr5: 25811708-25818269 Medicago truncatula
Medtr5g062190 1.0kb downstream 1.0kb downstream 1000 false chr5: 25811708-25812707 Medicago truncatula
Medtr5g062190 2.0kb upstream 2.0kb upstream 7562 true chr5: 25812708-25820269 Medicago truncatula
Medtr5g062190 2.0kb upstream 2.0kb upstream 2000 false chr5: 25818270-25820269 Medicago truncatula
Medtr5g062190 2.0kb downstream 2.0kb downstream 7562 true chr5: 25810708-25818269 Medicago truncatula
Medtr5g062190 2.0kb downstream 2.0kb downstream 2000 false chr5: 25810708-25812707 Medicago truncatula
Medtr5g062190 5.0kb upstream 5.0kb upstream 10562 true chr5: 25812708-25823269 Medicago truncatula
Medtr5g062190 5.0kb upstream 5.0kb upstream 5000 false chr5: 25818270-25823269 Medicago truncatula
Medtr5g062190 5.0kb downstream 5.0kb downstream 10562 true chr5: 25807708-25818269 Medicago truncatula
Medtr5g062190 5.0kb downstream 5.0kb downstream 5000 false chr5: 25807708-25812707 Medicago truncatula
Medtr5g062190 10.0kb upstream 10.0kb upstream 15562 true chr5: 25812708-25828269 Medicago truncatula
Medtr5g062190 10.0kb upstream 10.0kb upstream 10000 false chr5: 25818270-25828269 Medicago truncatula
Medtr5g062190 10.0kb downstream 10.0kb downstream 15562 true chr5: 25802708-25818269 Medicago truncatula
Medtr5g062190 10.0kb downstream 10.0kb downstream 10000 false chr5: 25802708-25812707 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311820 5265 Fabidae View MSA
124070135 5270 Rosid View MSA
123746465 5271 Pentapetalae View MSA
122796777 5272 Eudicot View MSA
122048839 5273 Angiosperm View MSA
121348630 5274 Embryophyte View MSA
123380948 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.782        
cufflinks 0.611        
cufflinks 0.651        
cufflinks 1.388        
cufflinks 0.73        
cufflinks 1.944       High
cufflinks 2.309       High
cufflinks 0.55        
cufflinks 0.539        

0 Strain