Gene : Medtr5g066000 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED Description:  ubiquitin carboxy-terminal hydrolase
Genomic Order:  3528 Name:  ? Medtr5g066000
Secondary Identifier:  ? PAC:31089437
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g066000 0.5kb upstream 0.5kb upstream 8526 true chr5: 27798538-27807063 Medicago truncatula
Medtr5g066000 0.5kb upstream 0.5kb upstream 500 false chr5: 27798538-27799037 Medicago truncatula
Medtr5g066000 0.5kb downstream 0.5kb downstream 8526 true chr5: 27799038-27807563 Medicago truncatula
Medtr5g066000 0.5kb downstream 0.5kb downstream 500 false chr5: 27807064-27807563 Medicago truncatula
Medtr5g066000 1.0kb upstream 1.0kb upstream 9026 true chr5: 27798038-27807063 Medicago truncatula
Medtr5g066000 1.0kb upstream 1.0kb upstream 1000 false chr5: 27798038-27799037 Medicago truncatula
Medtr5g066000 1.0kb downstream 1.0kb downstream 9026 true chr5: 27799038-27808063 Medicago truncatula
Medtr5g066000 1.0kb downstream 1.0kb downstream 1000 false chr5: 27807064-27808063 Medicago truncatula
Medtr5g066000 2.0kb upstream 2.0kb upstream 10026 true chr5: 27797038-27807063 Medicago truncatula
Medtr5g066000 2.0kb upstream 2.0kb upstream 2000 false chr5: 27797038-27799037 Medicago truncatula
Medtr5g066000 2.0kb downstream 2.0kb downstream 10026 true chr5: 27799038-27809063 Medicago truncatula
Medtr5g066000 2.0kb downstream 2.0kb downstream 2000 false chr5: 27807064-27809063 Medicago truncatula
Medtr5g066000 5.0kb upstream 5.0kb upstream 13026 true chr5: 27794038-27807063 Medicago truncatula
Medtr5g066000 5.0kb upstream 5.0kb upstream 5000 false chr5: 27794038-27799037 Medicago truncatula
Medtr5g066000 5.0kb downstream 5.0kb downstream 13026 true chr5: 27799038-27812063 Medicago truncatula
Medtr5g066000 5.0kb downstream 5.0kb downstream 5000 false chr5: 27807064-27812063 Medicago truncatula
Medtr5g066000 10.0kb upstream 10.0kb upstream 18026 true chr5: 27789038-27807063 Medicago truncatula
Medtr5g066000 10.0kb upstream 10.0kb upstream 10000 false chr5: 27789038-27799037 Medicago truncatula
Medtr5g066000 10.0kb downstream 10.0kb downstream 18026 true chr5: 27799038-27817063 Medicago truncatula
Medtr5g066000 10.0kb downstream 10.0kb downstream 10000 false chr5: 27807064-27817063 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296337 5265 Fabidae View MSA
124074060 5270 Rosid View MSA
123744401 5271 Pentapetalae View MSA
122795716 5272 Eudicot View MSA
122046939 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.101       High
cufflinks 2.682        
cufflinks 2.801        
cufflinks 0.753       Low
cufflinks 2.704        
cufflinks 0.443       Low
cufflinks 2.848        
cufflinks 2.343        
cufflinks 2.509        

0 Strain