Gene : Medtr5g043970 M. truncatula Mt4.0v1
Defline:  (1 of 4) PF00984 - UDP-glucose/GDP-mannose dehydrogenase family, central domain (UDPG_MGDP_dh) Description:  UDP-glucose 6-dehydrogenase family protein
Genomic Order:  2637 Name:  ? Medtr5g043970
Secondary Identifier:  ? PAC:31085877
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-4821 Medicago truncatula pathologic  
Mtruncatula PWY-7346 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g043970 0.5kb upstream 0.5kb upstream 3124 true chr5: 19325637-19328760 Medicago truncatula
Medtr5g043970 0.5kb upstream 0.5kb upstream 500 false chr5: 19328261-19328760 Medicago truncatula
Medtr5g043970 0.5kb downstream 0.5kb downstream 3124 true chr5: 19325137-19328260 Medicago truncatula
Medtr5g043970 0.5kb downstream 0.5kb downstream 500 false chr5: 19325137-19325636 Medicago truncatula
Medtr5g043970 1.0kb upstream 1.0kb upstream 3624 true chr5: 19325637-19329260 Medicago truncatula
Medtr5g043970 1.0kb upstream 1.0kb upstream 1000 false chr5: 19328261-19329260 Medicago truncatula
Medtr5g043970 1.0kb downstream 1.0kb downstream 3624 true chr5: 19324637-19328260 Medicago truncatula
Medtr5g043970 1.0kb downstream 1.0kb downstream 1000 false chr5: 19324637-19325636 Medicago truncatula
Medtr5g043970 2.0kb upstream 2.0kb upstream 4624 true chr5: 19325637-19330260 Medicago truncatula
Medtr5g043970 2.0kb upstream 2.0kb upstream 2000 false chr5: 19328261-19330260 Medicago truncatula
Medtr5g043970 2.0kb downstream 2.0kb downstream 4624 true chr5: 19323637-19328260 Medicago truncatula
Medtr5g043970 2.0kb downstream 2.0kb downstream 2000 false chr5: 19323637-19325636 Medicago truncatula
Medtr5g043970 5.0kb upstream 5.0kb upstream 7624 true chr5: 19325637-19333260 Medicago truncatula
Medtr5g043970 5.0kb upstream 5.0kb upstream 5000 false chr5: 19328261-19333260 Medicago truncatula
Medtr5g043970 5.0kb downstream 5.0kb downstream 7624 true chr5: 19320637-19328260 Medicago truncatula
Medtr5g043970 5.0kb downstream 5.0kb downstream 5000 false chr5: 19320637-19325636 Medicago truncatula
Medtr5g043970 10.0kb upstream 10.0kb upstream 12624 true chr5: 19325637-19338260 Medicago truncatula
Medtr5g043970 10.0kb upstream 10.0kb upstream 10000 false chr5: 19328261-19338260 Medicago truncatula
Medtr5g043970 10.0kb downstream 10.0kb downstream 12624 true chr5: 19315637-19328260 Medicago truncatula
Medtr5g043970 10.0kb downstream 10.0kb downstream 10000 false chr5: 19315637-19325636 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314409 5265 Fabidae View MSA
124072920 5270 Rosid View MSA
123748185 5271 Pentapetalae View MSA
122786809 5272 Eudicot View MSA
122047797 5273 Angiosperm View MSA
121346775 5274 Embryophyte View MSA
123428129 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 87.273     High High
cufflinks 15.242     High  
cufflinks 10.376     High  
cufflinks 22.925     High  
cufflinks 15.081     High  
cufflinks 10.473        
cufflinks 35.023     High  
cufflinks 6.589       Low
cufflinks 68.316     High High

0 Strain