Gene : Medtr5g043930 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR26374:SF199 - ZINC FINGER PROTEIN ZAT2-RELATED Description:  C2H2-type zinc finger protein
Genomic Order:  2636 Name:  ? Medtr5g043930
Secondary Identifier:  ? PAC:31088126
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g043930 0.5kb upstream 0.5kb upstream 2240 true chr5: 19300119-19302358 Medicago truncatula
Medtr5g043930 0.5kb upstream 0.5kb upstream 500 false chr5: 19301859-19302358 Medicago truncatula
Medtr5g043930 0.5kb downstream 0.5kb downstream 2240 true chr5: 19299619-19301858 Medicago truncatula
Medtr5g043930 0.5kb downstream 0.5kb downstream 500 false chr5: 19299619-19300118 Medicago truncatula
Medtr5g043930 1.0kb upstream 1.0kb upstream 2740 true chr5: 19300119-19302858 Medicago truncatula
Medtr5g043930 1.0kb upstream 1.0kb upstream 1000 false chr5: 19301859-19302858 Medicago truncatula
Medtr5g043930 1.0kb downstream 1.0kb downstream 2740 true chr5: 19299119-19301858 Medicago truncatula
Medtr5g043930 1.0kb downstream 1.0kb downstream 1000 false chr5: 19299119-19300118 Medicago truncatula
Medtr5g043930 2.0kb upstream 2.0kb upstream 3740 true chr5: 19300119-19303858 Medicago truncatula
Medtr5g043930 2.0kb upstream 2.0kb upstream 2000 false chr5: 19301859-19303858 Medicago truncatula
Medtr5g043930 2.0kb downstream 2.0kb downstream 3740 true chr5: 19298119-19301858 Medicago truncatula
Medtr5g043930 2.0kb downstream 2.0kb downstream 2000 false chr5: 19298119-19300118 Medicago truncatula
Medtr5g043930 5.0kb upstream 5.0kb upstream 6740 true chr5: 19300119-19306858 Medicago truncatula
Medtr5g043930 5.0kb upstream 5.0kb upstream 5000 false chr5: 19301859-19306858 Medicago truncatula
Medtr5g043930 5.0kb downstream 5.0kb downstream 6740 true chr5: 19295119-19301858 Medicago truncatula
Medtr5g043930 5.0kb downstream 5.0kb downstream 5000 false chr5: 19295119-19300118 Medicago truncatula
Medtr5g043930 10.0kb upstream 10.0kb upstream 11740 true chr5: 19300119-19311858 Medicago truncatula
Medtr5g043930 10.0kb upstream 10.0kb upstream 10000 false chr5: 19301859-19311858 Medicago truncatula
Medtr5g043930 10.0kb downstream 10.0kb downstream 11740 true chr5: 19290119-19301858 Medicago truncatula
Medtr5g043930 10.0kb downstream 10.0kb downstream 10000 false chr5: 19290119-19300118 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314751 5265 Fabidae View MSA
124073244 5270 Rosid View MSA
123753327 5271 Pentapetalae View MSA
122797874 5272 Eudicot View MSA
122051585 5273 Angiosperm View MSA
121348252 5274 Embryophyte View MSA
123380791 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.497     High High
cufflinks 0.058     Low  
cufflinks 0.022     Low Low
cufflinks 0.569        
cufflinks 0.034     Low  
cufflinks 0.887        
cufflinks 1.601        
cufflinks 0.048     Low  
cufflinks 0.708        

0 Strain