Gene : Medtr5g043850 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR19305 - SYNAPTOSOMAL ASSOCIATED PROTEIN Description:  soluble N-ethylmaleimide-sensitive factor adaptor protein
Genomic Order:  2631 Name:  ? Medtr5g043850
Secondary Identifier:  ? PAC:31088609
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g043850 0.5kb upstream 0.5kb upstream 2230 true chr5: 19255958-19258187 Medicago truncatula
Medtr5g043850 0.5kb upstream 0.5kb upstream 500 false chr5: 19257688-19258187 Medicago truncatula
Medtr5g043850 0.5kb downstream 0.5kb downstream 2230 true chr5: 19255458-19257687 Medicago truncatula
Medtr5g043850 0.5kb downstream 0.5kb downstream 500 false chr5: 19255458-19255957 Medicago truncatula
Medtr5g043850 1.0kb upstream 1.0kb upstream 2730 true chr5: 19255958-19258687 Medicago truncatula
Medtr5g043850 1.0kb upstream 1.0kb upstream 1000 false chr5: 19257688-19258687 Medicago truncatula
Medtr5g043850 1.0kb downstream 1.0kb downstream 2730 true chr5: 19254958-19257687 Medicago truncatula
Medtr5g043850 1.0kb downstream 1.0kb downstream 1000 false chr5: 19254958-19255957 Medicago truncatula
Medtr5g043850 2.0kb upstream 2.0kb upstream 3730 true chr5: 19255958-19259687 Medicago truncatula
Medtr5g043850 2.0kb upstream 2.0kb upstream 2000 false chr5: 19257688-19259687 Medicago truncatula
Medtr5g043850 2.0kb downstream 2.0kb downstream 3730 true chr5: 19253958-19257687 Medicago truncatula
Medtr5g043850 2.0kb downstream 2.0kb downstream 2000 false chr5: 19253958-19255957 Medicago truncatula
Medtr5g043850 5.0kb upstream 5.0kb upstream 6730 true chr5: 19255958-19262687 Medicago truncatula
Medtr5g043850 5.0kb upstream 5.0kb upstream 5000 false chr5: 19257688-19262687 Medicago truncatula
Medtr5g043850 5.0kb downstream 5.0kb downstream 6730 true chr5: 19250958-19257687 Medicago truncatula
Medtr5g043850 5.0kb downstream 5.0kb downstream 5000 false chr5: 19250958-19255957 Medicago truncatula
Medtr5g043850 10.0kb upstream 10.0kb upstream 11730 true chr5: 19255958-19267687 Medicago truncatula
Medtr5g043850 10.0kb upstream 10.0kb upstream 10000 false chr5: 19257688-19267687 Medicago truncatula
Medtr5g043850 10.0kb downstream 10.0kb downstream 11730 true chr5: 19245958-19257687 Medicago truncatula
Medtr5g043850 10.0kb downstream 10.0kb downstream 10000 false chr5: 19245958-19255957 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312774 5265 Fabidae View MSA
124069233 5270 Rosid View MSA
123745951 5271 Pentapetalae View MSA
122796965 5272 Eudicot View MSA
122050570 5273 Angiosperm View MSA
121349451 5274 Embryophyte View MSA
123428314 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.021     Low High

0 Strain