Gene : Medtr5g042590 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22891:SF9 - PROTEIN ARGONAUTE 7 Description:  eukaryotic translation initiation factor 2c
Genomic Order:  2565 Name:  ? Medtr5g042590
Secondary Identifier:  ? PAC:31091951
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g042590 0.5kb upstream 0.5kb upstream 5204 true chr5: 18720360-18725563 Medicago truncatula
Medtr5g042590 0.5kb upstream 0.5kb upstream 500 false chr5: 18720360-18720859 Medicago truncatula
Medtr5g042590 0.5kb downstream 0.5kb downstream 5204 true chr5: 18720860-18726063 Medicago truncatula
Medtr5g042590 0.5kb downstream 0.5kb downstream 500 false chr5: 18725564-18726063 Medicago truncatula
Medtr5g042590 1.0kb upstream 1.0kb upstream 5704 true chr5: 18719860-18725563 Medicago truncatula
Medtr5g042590 1.0kb upstream 1.0kb upstream 1000 false chr5: 18719860-18720859 Medicago truncatula
Medtr5g042590 1.0kb downstream 1.0kb downstream 5704 true chr5: 18720860-18726563 Medicago truncatula
Medtr5g042590 1.0kb downstream 1.0kb downstream 1000 false chr5: 18725564-18726563 Medicago truncatula
Medtr5g042590 2.0kb upstream 2.0kb upstream 6704 true chr5: 18718860-18725563 Medicago truncatula
Medtr5g042590 2.0kb upstream 2.0kb upstream 2000 false chr5: 18718860-18720859 Medicago truncatula
Medtr5g042590 2.0kb downstream 2.0kb downstream 6704 true chr5: 18720860-18727563 Medicago truncatula
Medtr5g042590 2.0kb downstream 2.0kb downstream 2000 false chr5: 18725564-18727563 Medicago truncatula
Medtr5g042590 5.0kb upstream 5.0kb upstream 9704 true chr5: 18715860-18725563 Medicago truncatula
Medtr5g042590 5.0kb upstream 5.0kb upstream 5000 false chr5: 18715860-18720859 Medicago truncatula
Medtr5g042590 5.0kb downstream 5.0kb downstream 9704 true chr5: 18720860-18730563 Medicago truncatula
Medtr5g042590 5.0kb downstream 5.0kb downstream 5000 false chr5: 18725564-18730563 Medicago truncatula
Medtr5g042590 10.0kb upstream 10.0kb upstream 14704 true chr5: 18710860-18725563 Medicago truncatula
Medtr5g042590 10.0kb upstream 10.0kb upstream 10000 false chr5: 18710860-18720859 Medicago truncatula
Medtr5g042590 10.0kb downstream 10.0kb downstream 14704 true chr5: 18720860-18735563 Medicago truncatula
Medtr5g042590 10.0kb downstream 10.0kb downstream 10000 false chr5: 18725564-18735563 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303353 5265 Fabidae View MSA
124068741 5270 Rosid View MSA
123740299 5271 Pentapetalae View MSA
122788825 5272 Eudicot View MSA
122043065 5273 Angiosperm View MSA
121352084 5274 Embryophyte View MSA
123428465 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.809       High
cufflinks 0.833        
cufflinks 1.203        
cufflinks 1.454        
cufflinks 0.88        
cufflinks 1.151        
cufflinks 2.323       High
cufflinks 1.109        
cufflinks 0.632       Low

0 Strain