Gene : Medtr5g045160 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR31373:SF0 - EMB Description:  plant/T31B5-30 protein
Genomic Order:  2702 Name:  ? Medtr5g045160
Secondary Identifier:  ? PAC:31086689
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g045160 0.5kb upstream 0.5kb upstream 2941 true chr5: 19794564-19797504 Medicago truncatula
Medtr5g045160 0.5kb upstream 0.5kb upstream 500 false chr5: 19797005-19797504 Medicago truncatula
Medtr5g045160 0.5kb downstream 0.5kb downstream 2941 true chr5: 19794064-19797004 Medicago truncatula
Medtr5g045160 0.5kb downstream 0.5kb downstream 500 false chr5: 19794064-19794563 Medicago truncatula
Medtr5g045160 1.0kb upstream 1.0kb upstream 3441 true chr5: 19794564-19798004 Medicago truncatula
Medtr5g045160 1.0kb upstream 1.0kb upstream 1000 false chr5: 19797005-19798004 Medicago truncatula
Medtr5g045160 1.0kb downstream 1.0kb downstream 3441 true chr5: 19793564-19797004 Medicago truncatula
Medtr5g045160 1.0kb downstream 1.0kb downstream 1000 false chr5: 19793564-19794563 Medicago truncatula
Medtr5g045160 2.0kb upstream 2.0kb upstream 4441 true chr5: 19794564-19799004 Medicago truncatula
Medtr5g045160 2.0kb upstream 2.0kb upstream 2000 false chr5: 19797005-19799004 Medicago truncatula
Medtr5g045160 2.0kb downstream 2.0kb downstream 4441 true chr5: 19792564-19797004 Medicago truncatula
Medtr5g045160 2.0kb downstream 2.0kb downstream 2000 false chr5: 19792564-19794563 Medicago truncatula
Medtr5g045160 5.0kb upstream 5.0kb upstream 7441 true chr5: 19794564-19802004 Medicago truncatula
Medtr5g045160 5.0kb upstream 5.0kb upstream 5000 false chr5: 19797005-19802004 Medicago truncatula
Medtr5g045160 5.0kb downstream 5.0kb downstream 7441 true chr5: 19789564-19797004 Medicago truncatula
Medtr5g045160 5.0kb downstream 5.0kb downstream 5000 false chr5: 19789564-19794563 Medicago truncatula
Medtr5g045160 10.0kb upstream 10.0kb upstream 12441 true chr5: 19794564-19807004 Medicago truncatula
Medtr5g045160 10.0kb upstream 10.0kb upstream 10000 false chr5: 19797005-19807004 Medicago truncatula
Medtr5g045160 10.0kb downstream 10.0kb downstream 12441 true chr5: 19784564-19797004 Medicago truncatula
Medtr5g045160 10.0kb downstream 10.0kb downstream 10000 false chr5: 19784564-19794563 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041452 5273 Angiosperm View MSA
122310004 5265 Fabidae View MSA
124064904 5270 Rosid View MSA
123749450 5271 Pentapetalae View MSA
122797220 5272 Eudicot View MSA
121346363 5274 Embryophyte View MSA
123428550 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.772     High High
cufflinks 3.691        
cufflinks 1.65       Low
cufflinks 24.671     High  
cufflinks 7.919        
cufflinks 12.102     High  
cufflinks 29.109     High  
cufflinks 4.143        
cufflinks 75.08     High High

0 Strain