Gene : Medtr5g044980 M. truncatula Mt4.0v1
Defline:  (1 of 1) 2.7.6.3 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase Description:  dihydropterin pyrophosphokinase/dihydropteroate synthase
Genomic Order:  2693 Name:  ? Medtr5g044980
Secondary Identifier:  ? PAC:31090698
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6147 Medicago truncatula pathologic  
Mtruncatula PWY-6612 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g044980 0.5kb upstream 0.5kb upstream 4480 true chr5: 19723619-19728098 Medicago truncatula
Medtr5g044980 0.5kb upstream 0.5kb upstream 500 false chr5: 19727599-19728098 Medicago truncatula
Medtr5g044980 0.5kb downstream 0.5kb downstream 4480 true chr5: 19723119-19727598 Medicago truncatula
Medtr5g044980 0.5kb downstream 0.5kb downstream 500 false chr5: 19723119-19723618 Medicago truncatula
Medtr5g044980 1.0kb upstream 1.0kb upstream 4980 true chr5: 19723619-19728598 Medicago truncatula
Medtr5g044980 1.0kb upstream 1.0kb upstream 1000 false chr5: 19727599-19728598 Medicago truncatula
Medtr5g044980 1.0kb downstream 1.0kb downstream 4980 true chr5: 19722619-19727598 Medicago truncatula
Medtr5g044980 1.0kb downstream 1.0kb downstream 1000 false chr5: 19722619-19723618 Medicago truncatula
Medtr5g044980 2.0kb upstream 2.0kb upstream 5980 true chr5: 19723619-19729598 Medicago truncatula
Medtr5g044980 2.0kb upstream 2.0kb upstream 2000 false chr5: 19727599-19729598 Medicago truncatula
Medtr5g044980 2.0kb downstream 2.0kb downstream 5980 true chr5: 19721619-19727598 Medicago truncatula
Medtr5g044980 2.0kb downstream 2.0kb downstream 2000 false chr5: 19721619-19723618 Medicago truncatula
Medtr5g044980 5.0kb upstream 5.0kb upstream 8980 true chr5: 19723619-19732598 Medicago truncatula
Medtr5g044980 5.0kb upstream 5.0kb upstream 5000 false chr5: 19727599-19732598 Medicago truncatula
Medtr5g044980 5.0kb downstream 5.0kb downstream 8980 true chr5: 19718619-19727598 Medicago truncatula
Medtr5g044980 5.0kb downstream 5.0kb downstream 5000 false chr5: 19718619-19723618 Medicago truncatula
Medtr5g044980 10.0kb upstream 10.0kb upstream 13980 true chr5: 19723619-19737598 Medicago truncatula
Medtr5g044980 10.0kb upstream 10.0kb upstream 10000 false chr5: 19727599-19737598 Medicago truncatula
Medtr5g044980 10.0kb downstream 10.0kb downstream 13980 true chr5: 19713619-19727598 Medicago truncatula
Medtr5g044980 10.0kb downstream 10.0kb downstream 10000 false chr5: 19713619-19723618 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309661 5265 Fabidae View MSA
124060429 5270 Rosid View MSA
123746213 5271 Pentapetalae View MSA
122790018 5272 Eudicot View MSA
122044899 5273 Angiosperm View MSA
121345768 5274 Embryophyte View MSA
123427891 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.982        
cufflinks 2.534        
cufflinks 3.424        
cufflinks 0.604       Low
cufflinks 4.485       High
cufflinks 0.495       Low
cufflinks 1.155        
cufflinks 3.439        
cufflinks 1.598        

0 Strain